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Report for CCDS25501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25501.1 Public Mus musculus 11 Fzd2 23 108 98 CCDS HistoryNCBI Gene:57265Re-query CCDS DB by CCDS ID:25501.1Re-query CCDS DB by GeneID:57265See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25501.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057893.6 ENSMUSP00000091463.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057893.6Link to Ensembl Protein Viewer:ENSMUSP00000091463.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000057893Re-query CCDS DB by Protein ID:ENSMUSP00000091463
Original member Current member NCBI NM_020510.2 NP_065256.1 Accepted alive Link to Nucleotide Sequence:NM_020510.2Link to Protein Sequence:NP_065256.1Re-query CCDS DB by Nucleotide ID:NM_020510Re-query CCDS DB by Protein ID:NP_065256Link to BLAST:NP_065256.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065256.1 570 Q9JIP6 570 100% 0 0

Chromosomal Locations for CCDS 25501.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 102604732 102606444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGCGGGCCCGCAGCGCCCTGCCCCGCAGCGCCCTGCCCCGCCTGCTGCTGCCACTGCTGCTGCTGCCGG
CCGCCGGACCGGCCCAGTTCCACGGGGAGAAGGGCATCTCCATCCCGGACCACGGCTTCTGCCAGCCCAT
CTCCATCCCGCTGTGCACGGACATCGCCTACAACCAGACCATCATGCCCAACCTTCTTGGCCACACGAAC
CAGGAAGACGCGGGCCTGGAGGTGCATCAGTTCTACCCGCTGGTGAAGGTGCAGTGCTCGCCCGAGCTGC
GCTTCTTCCTGTGCTCCATGTACGCGCCGGTGTGCACAGTGCTGGAGCAGGCCATCCCGCCGTGCCGCTC
CATCTGCGAGCGCGCGCGCCAAGGCTGCGAGGCGCTCATGAACAAGTTCGGCTTCCAATGGCCCGAGCGC
CTCCGCTGCGAGCATTTCCCGCGTCACGGCGCGGAGCAGATCTGCGTGGGCCAGAACCACTCGGAGGACG
GAGCTCCTGCGCTACTCACCACCGCGCCACCTTCTGGGCTGCAGCCCGGCGCGGGTGGCACCCCGGGCGG
CCCTGGCGGTGGTGGCTCGCCACCGCGTTACGCCACTCTGGAGCACCCTTTCCACTGTCCCCGCGTCCTC
AAGGTGCCGTCCTATCTCAGCTATAAGTTTCTGGGTGAGCGCGATTGTGCCGCGCCCTGCGAGCCCGCAC
GGCCCGACGGCTCTATGTTCTTCTCGCAAGAGGAGACTCGTTTTGCCCGTCTCTGGATCCTCACATGGTC
GGTGTTGTGCTGCGCTTCCACTTTCTTCACGGTCACCACCTATTTAGTGGACATGCAGCGATTTCGCTAC
CCAGAGCGGCCCATCATCTTTCTGTCCGGCTGCTACACCATGGTGTCAGTGGCCTACATTGCGGGCTTCG
TTCTCCAGGAGCGCGTGGTATGCAATGAGCGCTTCTCAGAGGACGGTTATCGCACGGTGGTGCAGGGCAC
TAAGAAAGAAGGCTGCACTATACTCTTCATGATGCTCTACTTCTTCAGCATGGCCAGCTCCATCTGGTGG
GTGATTCTGTCCCTCACCTGGTTCCTGGCAGCCGGAATGAAGTGGGGCCACGAGGCCATCGAGGCCAATT
CGCAGTACTTCCACCTGGCCGCCTGGGCCGTGCCGGCCGTCAAAACCATCACCATCTTGGCCATGGGCCA
GATCGACGGCGACCTGCTGAGCGGCGTGTGCTTCGTGGGCCTCAATAGCCTGGACCCGCTGCGGGGCTTC
GTGCTGGCGCCGCTCTTCGTATACCTGTTCATCGGTACATCCTTCCTGCTGGCCGGCTTCGTGTCACTCT
TCCGCATCCGCACCATCATGAAGCACGACGGCACCAAGACGGAGAAGCTGGAGAGGCTCATGGTGCGCAT
TGGCGTCTTCTCGGTGCTCTACACGGTACCGGCCACCATCGTCATCGCCTGCTACTTCTATGAGCAGGCC
TTCCGCGAGCACTGGGAGCGCTCCTGGGTAAGCCAGCACTGCAAGAGCCTAGCCATCCCCTGCCCGGCCC
ACTACACGCCCCGCATGTCGCCCGACTTCACAGTCTACATGATCAAATACCTCATGACGCTCATCGTGGG
CATCACGTCGGGCTTCTGGATCTGGTCCGGCAAGACACTGCACTCGTGGAGGAAGTTCTACACTCGTCTC
ACCAACAGCCGGCATGGCGAGACCACTGTGTGA

Translation (570 aa):
MRARSALPRSALPRLLLPLLLLPAAGPAQFHGEKGISIPDHGFCQPISIPLCTDIAYNQTIMPNLLGHTN
QEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPER
LRCEHFPRHGAEQICVGQNHSEDGAPALLTTAPPSGLQPGAGGTPGGPGGGGSPPRYATLEHPFHCPRVL
KVPSYLSYKFLGERDCAAPCEPARPDGSMFFSQEETRFARLWILTWSVLCCASTFFTVTTYLVDMQRFRY
PERPIIFLSGCYTMVSVAYIAGFVLQERVVCNERFSEDGYRTVVQGTKKEGCTILFMMLYFFSMASSIWW
VILSLTWFLAAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVGLNSLDPLRGF
VLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLERLMVRIGVFSVLYTVPATIVIACYFYEQA
FREHWERSWVSQHCKSLAIPCPAHYTPRMSPDFTVYMIKYLMTLIVGITSGFWIWSGKTLHSWRKFYTRL
TNSRHGETTV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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