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Report for CCDS26146.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26146.1 Public Mus musculus 12 Serpina5 23 108 98 CCDS HistoryNCBI Gene:268591Re-query CCDS DB by CCDS ID:26146.1Re-query CCDS DB by GeneID:268591See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26146.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021495.3 ENSMUSP00000021495.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021495.3Link to Ensembl Protein Viewer:ENSMUSP00000021495.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000021495Re-query CCDS DB by Protein ID:ENSMUSP00000021495
Original member Current member NCBI NM_172953.3 NP_766541.2 Accepted alive Link to Nucleotide Sequence:NM_172953.3Link to Protein Sequence:NP_766541.2Re-query CCDS DB by Nucleotide ID:NM_172953Re-query CCDS DB by Protein ID:NP_766541Link to BLAST:NP_766541.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766541.2 405 P70458 405 100% 0 0

Chromosomal Locations for CCDS 26146.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 104101682 104102294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104103144 104103414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104103730 104103877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104105168 104105353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1218 nt):
ATGAGGTTCTTCCCCATTCTGTGCCTGGTGCTGTTCATCAGCCATGGGGTGGCTTCCCGCCGACACTCCC
ATTCCAAGAAGAAGAAGGCTAAAGAGTCCTCGGTGGGTGCTGTGGGACCTCCCAGTAGCAAAGACTTTGC
TTTCAGACTCTACAGGGCCTTGGTTTCTGAATCCCCTGGTCAGAATGTCTTCTTCTCCCCCTTGAGCGTG
TCTATGAGTTTGGGCATGCTCTCCCTGGGGGCTGGCTTGAAGACGAAGACCCAGATCCTAGATGGCCTAG
GCCTCAGCCTCCAGCAAGGCCAAGAAGACAAGCTCCACAAGGGCTTCCAACAGCTGCTACAGAGATTCAG
GCAGCCTAGTGATGGCCTGCAGCTGAGCCTGGGCAGTGCCCTTTTTAAAGACCCAGCAGTACATATCCGG
GACGACTTCCTGAGTGCCATGAAGACACTGTACATGTCAGACACTTTCTCTACCAACTTTGGGAACCCTG
AAATCGCCAAGAAGCAGATCAACAACTATGTAGCCAAGCAGACCAAGGGCAAGATTGTAGACTTTATCAA
GGATCTTGACAGCACCCATGTCATGATAGTGGTAAATTACATCTTCTTCAAAGCCAAGTGGCAGACGGCC
TTCAGTGAGACAAACACCCACAAGATGGATTTCCATGTGACCCCCAAAAGGACCACACAGGTGCCCATGA
TGAACCGTGAAGATGGGTATTCCTACTACCTGGACCAAAACATCTCCTGCACGGTGGTGGGGATCCCTTA
TCAAGGCAATGCCATCGCTCTATTTATTCTCCCCAGCGAGGGCAAGATGAAGCAGGTGGAGGATGGCCTG
GATGAGAGAACATTGAGGAACTGGCTTAAGATGTTCACCAAAAGACGCTTAGATCTTTACCTCCCCAAGT
TCTCCATTGAGGCTACCTACAAACTGGAAAATGTCCTCCCCAAGCTGGGCATCCAGGACGTCTTCACCAC
CCATGCTGACTTGTCTGGCATTACTGACCATACCAATATCAAGTTGTCTGAGATGGTGCACAAATCCATG
ATGGAGGTTGAAGAGTCAGGAACCACAGCAGCTGCCATCACAGGAGCCATCTTCACATTCAGATCTGCTC
GGCCGAGCTCCCTGAAGATAGAATTCACCAGACCCTTTCTGCTGACCCTTATGGAGGATTCACATATACT
TTTCGTTGGCAAGGTGACCCGGCCCTGA

Translation (405 aa):
MRFFPILCLVLFISHGVASRRHSHSKKKKAKESSVGAVGPPSSKDFAFRLYRALVSESPGQNVFFSPLSV
SMSLGMLSLGAGLKTKTQILDGLGLSLQQGQEDKLHKGFQQLLQRFRQPSDGLQLSLGSALFKDPAVHIR
DDFLSAMKTLYMSDTFSTNFGNPEIAKKQINNYVAKQTKGKIVDFIKDLDSTHVMIVVNYIFFKAKWQTA
FSETNTHKMDFHVTPKRTTQVPMMNREDGYSYYLDQNISCTVVGIPYQGNAIALFILPSEGKMKQVEDGL
DERTLRNWLKMFTKRRLDLYLPKFSIEATYKLENVLPKLGIQDVFTTHADLSGITDHTNIKLSEMVHKSM
MEVEESGTTAAAITGAIFTFRSARPSSLKIEFTRPFLLTLMEDSHILFVGKVTRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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