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Report for CCDS2672.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2672.2 Public Homo sapiens 3 DLEC1 24 110 108 CCDS HistoryNCBI Gene:9940Re-query CCDS DB by CCDS ID:2672.2Re-query CCDS DB by GeneID:9940See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 2672.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308059.11 ENSP00000308597.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308059.11Link to Ensembl Protein Viewer:ENSP00000308597.6Re-query CCDS DB by Nucleotide ID:ENST00000308059Re-query CCDS DB by Protein ID:ENSP00000308597
Original member Current member NCBI NM_007335.4 NP_031361.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007335.4Link to Protein Sequence:NP_031361.2Re-query CCDS DB by Nucleotide ID:NM_007335Re-query CCDS DB by Protein ID:NP_031361Link to BLAST:NP_031361.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031361.2 1755 Q9Y238-1 1755 100% 0 0

Chromosomal Locations for CCDS 2672.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 38039226 38039636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38045543 38045693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38059742 38059852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38062169 38062368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38062581 38062801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38063841 38063919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38084158 38084245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38085274 38085447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38086241 38086377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38088296 38088388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38092790 38092880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38093605 38093767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38094879 38095071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38095888 38095946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38096569 38096737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38097182 38097275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38097507 38097637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38097744 38097902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38100286 38100425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38107584 38107737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38108405 38108515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38109432 38109562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38110099 38110281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38111677 38111747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38112210 38112361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38114342 38114460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38114983 38115053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38116453 38116658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38116773 38116889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38116975 38117100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38117208 38117302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38117527 38117611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38117806 38118024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38120448 38120609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38121628 38121781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38122071 38122194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38122289 38122412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5268 nt):
ATGGAGACCAGGAGCTCCAAAACGCGGAGGTCTTTAGCGTCCCGGACCAACGAGTGCCAGGGGACAATGT
GGGCGCCAACTTCGCCACCAGCCGGGTCCAGCAGCCCCAGCCAGCCCACCTGGAAGTCCTCCTTGTATTC
CTCCCTCGCCTACTCTGAGGCCTTCCACTACAGCTTCGCAGCCCGGCCCCGCCGCCTCACGCAGCTTGCG
CTGGCGCAGCGTCCCGAGCCTCAGCTGCTTCGTCTGCGCCCCTCCTCGCTGCGCACCCAAGATATCTCGC
ACTTGCTCACCGGCGTCTTCCGCAACTTGTACTCAGCCGAGGTCATCGGCGACGAAGTGAGCGCAAGCTT
GATCAAGGCCCGCGGCAGCGAGAATGAGCGCCACGAGGAGTTCGTGGACCAGCTGCAGCAGATTCGGGAG
CTCTATAAGCAGCGGCTGGATGAGTTTGAAATGTTGGAGAGACATATCACTCAGGCCCAAGCACGGGCTA
TTGCGGAAAATGAGCGGGTCATGAGCCAGGCTGGAGTACAGGACCTCGAGAGCCTTGTCAGGTTGCCTCC
AGTGAAGAGTGTCTCCAGATGGTGTATAGACAGCGAGTTGCTACGGAAACATCATTTGATCTCCCCAGAA
GATTACTACACCGATACAGTGCCGTTTCACTCTGCACCTAAAGGCATCTCCCTACCTGGATGTTCAAAAC
TGACATTTAGCTGTGAGAAGCGTTCCGTCCAGAAGAAAGAGCTGAACAAGAAGCTTGAAGATTCATGCAG
GAAGAAGCTTGCTGAGTTCGAAGATGAGTTAGACCACACTGTGGACAGCCTGACATGGAATTTAACTCCT
AAGGCCAAAGAAAGGACCAGAGAACCTCTCAAGAAAGCAAGTCAACCAAGGAATAAAAACTGGATGAACC
ACTTACGTGTGCCACAGAGAGAGCTAGACAGACTTCTGCTTGCCAGAATGGAGAGTCGGAACCACTTCCT
AAAAAATCCCCGTTTTTTTCCTCCTAACACTCGATATGGAGGCAAGTCTCTTGTTTTTCCTCCAAAGAAG
CCAGCACCGATAGGAGAATTCCAGAGTACAGAGCCAGAACAGAGTTGTGCTGATACTCCAGTGTTTCTAG
CTAAGCCACCAATTGGGTTTTTCACAGATTATGAAATTGGTCCAGTTTATGAGATGGTAATTGCGCTGCA
GAACACCACCACGACCAGCCGCTACCTGCGAGTCCTCCCGCCTTCCACGCCATACTTCGCTCTGGGACTG
GGGATGTTCCCAGGAAAAGGTGGAATGGTGGCTCCTGGAATGACCTGCCAGTACATTGTCCAGTTTTTTC
CCGACTGCCTTGGGGATTTTGATGATTTTATTTTAGTGGAGACCCAGTCAGCCCACACACTTCTGATCCC
CCTGCAGGCCCGGAGGCCGCCCCCCGTGCTGACATTGTCACCGGTGTTGGACTGTGGTTACTGCCTCATT
GGGGGAGTCAAGATGACCAGATTCATCTGCAAAAATGTGGGTTTCAGTGTTGGCAGGTTCTGCATTATGC
CCAAAACAAGCTGGCCACCACTAAGTTTCAAGGCCATTGCAACCGTCGGCTTTGTTGAACAACCTCCTTT
TGGAATCCTGCCTTCGGTGTTTGAGCTGGCCCCGGGACATGCTATATTAGTGGAGGTCTTGTTTTCCCCA
AAGAGCCTAGGAAAGGCAGAGCAGACCTTCATCATCATGTGCGACAACTGCCAGATAAAGGAGCTGGTGA
CCATAGGAATTGGGCAGCTGATTGCTTTGGATCTGATCTATATTTCTGGTGAAAAAAGCCAGCCAGACCC
TGGAGAGCTCACAGACTTAACAGCCCAGCACTTCATACGATTTGAGCCTGAAAACCTTCGGTCCACGGCT
AGGAAGCAGCTGATTATTAGAAATGCTACGCACGTGGAGCTGGCCTTCTACTGGCAGATCATGAAGCCCA
ACCTGCAGCCCCTCATGCCTGGAGAAACCTTCAGCATGGACAGCATCAAGTGCTACCCCGACAAGGAGAC
TGCCTTCTCCATCATGCCCAGAAAGGGGGTTCTAAGCCCCCACACAGACCACGAGTTCATCCTGAGCTTT
TCTCCTCATGAGCTGAGGGATTTTCACAGTGTGCTCCAGATGGTGCTAGAGGAAGTCCCAGAGCCTGTAA
GTTCAGAAGCGGAGAGCCTGGGGCACTCCTCCTACTCTGTGGATGATGTGATTGTCCTGGAAATCGAGGT
GAAAGGCTCAGTAGAACCTTTCCAGGTTCTCTTAGAGCCATATGCCCTCATCATCCCAGGGGAGAACTAC
ATTGGGATAAATGTGAAGAAGGCTTTTAAGATGTGGAACAACAGCAAGTCACCCATCAGATACCTGTGGG
GGAAGATCAGCGACTGCCACATCATTGAAGTGGAGCCCGGCACAGGGGTCATAGAGCCCAGTGAGGTCGG
GGATTTTGAGTTGAACTTTACTGGGGGTGTCCCTGGCCCCACAAGCCAGGACCTGCTGTGTGAAATCGAA
GACTCGCCCTCGCCAGTGGTGTTACACATTGAGGCTGTCTTTAAGGGGCCTGCCCTCATCATCAACGTCT
CAGCCCTTCAGTTTGGTCTGCTCCGCCTGGGGCAGAAAGCCACAAACTCCATCCAGATCCGGAACGTCAG
CCAGCTCCCAGCCACATGGCGCATGAAGGAGAGCCCAGTCTCCCTCCAGGAAAGGCCTGAGGATGTGTCT
CCCTTCGACATTGAGCCTTCGAGTGGCCAGCTTCACTCTCTGGGGGAGTGCAGGGTGGACATCACCTTGG
AGGCCCTGCACTGCCAGCATCTGGAGACCGTCCTGGAGCTGGAGGTGGAAAATGGTGCCTGGAGCTACCT
TCCTGTGTATGCTGAGGTACAGAAGCCCCATGTGTACCTACAGAGCAGCCAGGTGGAGGTTAGAAATCTC
TACCTGGGTGTGCCCACGAAGACAACCATCACACTTATCAATGGCACGCTCCTGCCTACCCAGTTCCACT
GGGGCAAGCTCCTCGGACACCAAGCAGAATTCTGCATGGTGACAGTCTCCCCCAAACATGGCCTGCTGGG
CCCAAGTGAGGAGTGCCAGCTCAAGTTGGAGTTGACTGCTCATACCCAGGAAGAGCTGACCCATCTGGCC
CTCCCTTGTCACGTGTCAGGCATGAAGAAGCCACTGGTTCTAGGCATTTCTGGGAAGCCCCAGGGACTGC
AAGTGGCCATTACCATCTCTAAGGAGAGCTCTGATTGCAGCACAGAGCAGTGGCCAGGCCACCCAAAGGA
GCTCCGCCTGGACTTTGGCTCAGCGGTGCCACTGAGGACCCGTGTGACTCGCCAGCTCATTCTCACCAAT
CGCTCCCCAATACGGACCCGTTTCTCCCTCAAGTTTGAGTATTTCGGGAGCCCCCAAAACAGCCTGAGCA
AAAAGACCAGCCTTCCCAACATGCCTCCTGCCCTGCTAAAGACAGTGCGGATGCAAGAGCACCTGGCCAA
GCGAGAGCAGCTGGATTTTATGGAGAGCATGCTATCCCACGGGAAAGGAGCTGCTTTCTTCCCTCACTTT
TCCCAGGGCATGCTGGGGCCCTACCAGCAGCTGTGCATTGACATCACAGGCTGTGCCAACATGTGGGGCG
AGTACTGGGACAACCTCATCTGCACGGTGGGAGACCTGCTGCCGGAAGTCATCCCAGTGCACATGGCAGC
GGTGGGCTGCCCCATCAGCTCCCTGAGGACCACCTCCTACACTATTGACCAGGCCCAGAAGGAACCAGCC
ATGAGGTTCGGCACCCAGGTCTCCGGAGGAGACACAGTTACCCGAACCCTTCGCCTGAATAACTCCAGCC
CCTGTGACATCCGCCTGGATTGGGAGACCTATGTTCCAGAAGACAAGGAAGACCGGCTGGTGGAGCTGCT
GGTGTTTTATGGGCCACCTTTCCCGCTGCGGGACCAAGCCGGGAATGAGCTTGTGTGCCCTGATACCCCT
GAGGGTGGCTGCCTCCTCTGGTCCCCAGGCCCCTCCAGTTCATCGGAATTCAGCCATGAAACTGACTCAT
CAGTTGAGGGCAGCTCCAGTGCCAGCAATAGGGTGGCACAGAAGCTCATCTCAGTCATCCTGCAGGCACA
TGAGGGGGTGCCCTCCGGCCACCTGTACTGTATCAGCCCCAAGCAGGTGGTGGTCCCTGCTGGGGGCAGC
AGTACCATCTACATCTCCTTCACCCCTATGGTGCTCAGCCCTGAGATCCTGCACAAGGTGGAGTGTACTG
GCTACGCCCTGGGTTTCATGAGCTTGGACAGCAAGGTGGAAAGGGAGATTCCAGGGAAGAGGCATCGCCT
GCAGGACTTTGCGGTGGGACCCCTGAAACTGGACCTGCATAGCTACGTGAGGCCTGCACAGCTAAGTGTG
GAGCTGGACTACGGCGGCAGTATGGAATTCCAGTGCCAGGCCAGTGACCTCATTCCCGAGCAGCCCTGCT
CTGGGGTGCTGAGTGAGCTGGTGACCACCCACCACCTGAAGCTGACCAACACTACAGAGATCCCACACTA
CTTCCGGCTTATGGTCTCCAGGCCCTTCTCCGTTTCTCAAGATGGGGCGAGCCAGGACCACAGAGCTCCT
GGCCCTGGCCAGAAGCAGGAGTGTGAGGAGGAGACAGCCTCAGCGGACAAGCAGCTGGTGCTCCAAGCAC
AGGAGAACATGCTGGTGAACGTGTCCTTCTCACTCTCCCTGGAGCTGCTCTCCTATCAGAAGCTCCCAGC
TGACCAGACACTGCCTGGGGTGGACATTCAGCAGAGTGCGAGTGGAGAGAGAGAGATGGTGTTTACTCAG
AACCTGCTCCTGGAGTACACCAACCAGACCACTCAGGTGGTGCCCCTGCGGGCTGTGGTGGCCGTGCCTG
AGCTGCAGCTCTCCACCAGCTGGGTGGACTTTGGGACCTGCTTTGTGAGCCAGCAGCGAGTCCGGGAGGT
CTACCTGATGAACCTGAGCGGGTGCCGAAGCTACTGGACTATGCTGATGGGCCAGCAGGAGCCAGCCAAG
GCCGCTGTGGCCTTCAGGGTCTCCCCAAACAGTGGGCTGCTAGAAGCACGATCCGCCAATGCACCCCCAA
CCTCCATCGCCTTGCAGGTTTTCTTCACTGCCAGGAGTAGTGAGCTGTACGAGTCCACGATGGTGGTGGA
AGGTGTGCTCGGTGAGAAGTCCTGCACCCTGCGGCTCCGGGGCCAAGGCTCCTATGATGAGAGATACATG
TTGCCTCACCAGCCCTGA

Translation (1755 aa):
METRSSKTRRSLASRTNECQGTMWAPTSPPAGSSSPSQPTWKSSLYSSLAYSEAFHYSFAARPRRLTQLA
LAQRPEPQLLRLRPSSLRTQDISHLLTGVFRNLYSAEVIGDEVSASLIKARGSENERHEEFVDQLQQIRE
LYKQRLDEFEMLERHITQAQARAIAENERVMSQAGVQDLESLVRLPPVKSVSRWCIDSELLRKHHLISPE
DYYTDTVPFHSAPKGISLPGCSKLTFSCEKRSVQKKELNKKLEDSCRKKLAEFEDELDHTVDSLTWNLTP
KAKERTREPLKKASQPRNKNWMNHLRVPQRELDRLLLARMESRNHFLKNPRFFPPNTRYGGKSLVFPPKK
PAPIGEFQSTEPEQSCADTPVFLAKPPIGFFTDYEIGPVYEMVIALQNTTTTSRYLRVLPPSTPYFALGL
GMFPGKGGMVAPGMTCQYIVQFFPDCLGDFDDFILVETQSAHTLLIPLQARRPPPVLTLSPVLDCGYCLI
GGVKMTRFICKNVGFSVGRFCIMPKTSWPPLSFKAIATVGFVEQPPFGILPSVFELAPGHAILVEVLFSP
KSLGKAEQTFIIMCDNCQIKELVTIGIGQLIALDLIYISGEKSQPDPGELTDLTAQHFIRFEPENLRSTA
RKQLIIRNATHVELAFYWQIMKPNLQPLMPGETFSMDSIKCYPDKETAFSIMPRKGVLSPHTDHEFILSF
SPHELRDFHSVLQMVLEEVPEPVSSEAESLGHSSYSVDDVIVLEIEVKGSVEPFQVLLEPYALIIPGENY
IGINVKKAFKMWNNSKSPIRYLWGKISDCHIIEVEPGTGVIEPSEVGDFELNFTGGVPGPTSQDLLCEIE
DSPSPVVLHIEAVFKGPALIINVSALQFGLLRLGQKATNSIQIRNVSQLPATWRMKESPVSLQERPEDVS
PFDIEPSSGQLHSLGECRVDITLEALHCQHLETVLELEVENGAWSYLPVYAEVQKPHVYLQSSQVEVRNL
YLGVPTKTTITLINGTLLPTQFHWGKLLGHQAEFCMVTVSPKHGLLGPSEECQLKLELTAHTQEELTHLA
LPCHVSGMKKPLVLGISGKPQGLQVAITISKESSDCSTEQWPGHPKELRLDFGSAVPLRTRVTRQLILTN
RSPIRTRFSLKFEYFGSPQNSLSKKTSLPNMPPALLKTVRMQEHLAKREQLDFMESMLSHGKGAAFFPHF
SQGMLGPYQQLCIDITGCANMWGEYWDNLICTVGDLLPEVIPVHMAAVGCPISSLRTTSYTIDQAQKEPA
MRFGTQVSGGDTVTRTLRLNNSSPCDIRLDWETYVPEDKEDRLVELLVFYGPPFPLRDQAGNELVCPDTP
EGGCLLWSPGPSSSSEFSHETDSSVEGSSSASNRVAQKLISVILQAHEGVPSGHLYCISPKQVVVPAGGS
STIYISFTPMVLSPEILHKVECTGYALGFMSLDSKVEREIPGKRHRLQDFAVGPLKLDLHSYVRPAQLSV
ELDYGGSMEFQCQASDLIPEQPCSGVLSELVTTHHLKLTNTTEIPHYFRLMVSRPFSVSQDGASQDHRAP
GPGQKQECEEETASADKQLVLQAQENMLVNVSFSLSLELLSYQKLPADQTLPGVDIQQSASGEREMVFTQ
NLLLEYTNQTTQVVPLRAVVAVPELQLSTSWVDFGTCFVSQQRVREVYLMNLSGCRSYWTMLMGQQEPAK
AAVAFRVSPNSGLLEARSANAPPTSIALQVFFTARSSELYESTMVVEGVLGEKSCTLRLRGQGSYDERYM
LPHQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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