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Report for CCDS26772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26772.1 Public Mus musculus 13 Ankrd55 23 108 98 CCDS HistoryNCBI Gene:77318Re-query CCDS DB by CCDS ID:26772.1Re-query CCDS DB by GeneID:77318See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26772.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022275.13 ENSMUSP00000022275.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022275.13Link to Ensembl Protein Viewer:ENSMUSP00000022275.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000022275Re-query CCDS DB by Protein ID:ENSMUSP00000022275
Original member Current member NCBI NM_029898.3 NP_084174.2 Accepted alive Link to Nucleotide Sequence:NM_029898.3Link to Protein Sequence:NP_084174.2Re-query CCDS DB by Nucleotide ID:NM_029898Re-query CCDS DB by Protein ID:NP_084174Link to BLAST:NP_084174.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084174.2 626 Q8BLD6 626 100% 0 0

Chromosomal Locations for CCDS 26772.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 112288928 112288982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112318425 112318547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112323052 112323182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112327129 112327238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112336215 112336275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112348734 112348862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112355906 112356090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112363415 112363582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112367684 112368348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112381129 112381221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112383419 112383579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1881 nt):
ATGAGACAGGCTACCATGGATTTCAGCACCTCTTCTGTGTTTGATCAGCACAAAGGTGACTCATCTGAAG
AAGTCGACCTGGCAATGGTGTATCAGGCAGCATCGAATGGAGATGTCAACTCTCTGACCTCCGTCATTCG
GGAGGATCCGTCCATCCTGGAGTGTTGTGACAGTGAAGGATGCACGCCCTTGATGCACGCGGTTTCAGGA
CGTCAAGTGGACACAGTGAAATTGCTGCTAAAGATGGGTGCCAACATTAACACACAGGATGCGTATGGTC
GCACCAGTTTATGCCTGGCAACCTACCTGGGCTGGCTTGAAGGCTGTGTGAGTCTGCTCAGAAACGGTGC
CAAGCACAACATCCCAGATAAAAATGGCCGCCTACCTCTGCACGCTGCCACTGCAGAGCCTGATGTGAGG
CTCCTCATAGTCCTGCTGCAGCAGTCCAGCCTCAGTGAGATCAACCATCAAGACACAGAGGGGATGACGC
CACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATGCTGTTGAAGAAGGGGGCAGACCC
CACCCTTGTGGACAAGGATTTTAAAACAGCCCTCCACTGGGCAGTCCAGAGTGGAAATAGAATTCTGTGC
TCCATCATTCTGAGCCATCGGCAGGGCCCGTCCATTATCAACTACGACGACGAGAGTGGGAAGACGTGCG
TCCATATCGCTGCAGCTTCCGGTTTCGGAGACATCATCAACGATTTGGCAAAGGTCCCCGAGTGTAACCT
GCAGGCTCTGGATGTGGATGACAGGACACCCCTGCACTGGGCTGCAGCTTCTGGAAAGGCAGAATGTGTC
CAGTCACTGCTGGATCTGGGCATGGACAGCAACCTAAGGGACATTAACGAGAGCACGCCCCTGGCCTACG
CCTTGTACTGCGGTCACACGGCCTGTGTCCGGCTCCTTTCCCGAGAAGGCCGAGCAGAGCCTGCTAGGCC
TCTTCCCTCCCAAAACAGCCAACCCCAAAAGAAGGAAGGACGATTCAGCATGCTCAACCAAATCTTCTGC
AAAAACAAGAAAGAGGAGCAGAAAGCCCATCAGAAAGACCAGAGCAGGGCCAGACCTAAGGAGGAGGAGA
CCTCGGAAGTCAATGACATCATCGCCACCTTTGACAGTGTCGTGGATACCAACTGCCAAGGTCAGCCTGG
TGACCAGGTGGACATGGTTGTCTTTAAGAAGAGGACCTCGGAGAATTCAAAGTATCTCTTGCCAGAAAAG
AAATCCCTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAGAGTCTCCCACCCATCACCCTGGGCGGTC
ACTTCCTGACAGCCTCCCAGGGAGCCGTGTCCCATGCTGGCCTGAACGCTGGTCCTCAGCATACTGCCCA
GCGTTCTCAGAAAAGTCGAAGCGAACAGGACTTATTAAATAATAGGACTGGCTGCCCGGTGTCACTAGAG
AATCCTTGGAAGGGTGACACCAGGCAGGTGTTCTCCTGCAAGGCTTGGACCGTGTCTTCTTCTGATAAGT
TACTAGACAGGCTGTTCGCTGGCCAGCCTGGTCACCAGGAGCTCTCTGGGCCACCACATCTTCCTCATCT
ACATAATCCCTCATCAGGACAAGCTCTTCAGCATCTCTCCCCAAACAGACCTAAAATCAGAGATCTCCCC
TTCACTCGGAACAGCCTTGCACCTCTGCCAGACCAAAAATTTCTATCTGGAGAACCCCTGAGAACAAACC
GGGTGCTTCCAGCAATTCCAAGCCAGAGGGGACATGACCCATCACCAGCTGGAGAGAGCCAGAGGGGACA
TGACCCACCACGAGCTGAAGAGAGCGGGGGTTCCTCCAGTCCCACCCATGATGAAAACTAA

Translation (626 aa):
MRQATMDFSTSSVFDQHKGDSSEEVDLAMVYQAASNGDVNSLTSVIREDPSILECCDSEGCTPLMHAVSG
RQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVR
LLIVLLQQSSLSEINHQDTEGMTPLHWAAFHNRPQHTQMLLKKGADPTLVDKDFKTALHWAVQSGNRILC
SIILSHRQGPSIINYDDESGKTCVHIAAASGFGDIINDLAKVPECNLQALDVDDRTPLHWAAASGKAECV
QSLLDLGMDSNLRDINESTPLAYALYCGHTACVRLLSREGRAEPARPLPSQNSQPQKKEGRFSMLNQIFC
KNKKEEQKAHQKDQSRARPKEEETSEVNDIIATFDSVVDTNCQGQPGDQVDMVVFKKRTSENSKYLLPEK
KSLARKGLPPIRTQSLPPITLGGHFLTASQGAVSHAGLNAGPQHTAQRSQKSRSEQDLLNNRTGCPVSLE
NPWKGDTRQVFSCKAWTVSSSDKLLDRLFAGQPGHQELSGPPHLPHLHNPSSGQALQHLSPNRPKIRDLP
FTRNSLAPLPDQKFLSGEPLRTNRVLPAIPSQRGHDPSPAGESQRGHDPPRAEESGGSSSPTHDEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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