NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS26905.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26905.1 Public Mus musculus 14 Gnl3 23 108 98 CCDS HistoryNCBI Gene:30877Re-query CCDS DB by CCDS ID:26905.1Re-query CCDS DB by GeneID:30877See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26905.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037739.7 ENSMUSP00000047119.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037739.7Link to Ensembl Protein Viewer:ENSMUSP00000047119.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000037739Re-query CCDS DB by Protein ID:ENSMUSP00000047119
Original member Current member NCBI NM_153547.6 NP_705775.2 Accepted alive Link to Nucleotide Sequence:NM_153547.6Link to Protein Sequence:NP_705775.2Re-query CCDS DB by Nucleotide ID:NM_153547Re-query CCDS DB by Protein ID:NP_705775Link to BLAST:NP_705775.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705775.2 538 Q8CI11-1 538 100% 0 0

Chromosomal Locations for CCDS 26905.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 31012552 31012634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31012723 31012789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31013167 31013324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31013429 31013565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31013653 31013795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31014053 31014227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31014590 31014677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31014906 31015026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31015275 31015384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31016322 31016454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31016827 31016907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31017057 31017167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31017276 31017413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31017808 31017866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31018929 31018941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGAAGAGGCCTAAGTTAAAGAAAGCGAGTAAACGTATGACCTGCCATAAGCGATATAAAATTCAAAAAA
AGGTCCGAGAACATCATCGAAAATTAAGGAAGGAAGCTAAAAAACGGGGTCACAAGAAGCCTAGGAAGGA
CCCAGGTGTTCCAAATAGTGCTCCCTTTAAAGAGGCTCTTCTTCGTGAAGCTGAACTAAGGAAACAGCAG
CTTGAAGAACTAAAACAGCAGCAGAAACTTGATAGGCAAAAAGAGCAAGAAAGGAAAAGAAAACTTGAAG
TTAGCCCTGGTGATGAGCAGTCTAATGTGGAAACTAGGGAGGAATCTGACGAGCCCAAAAGAAAGAAAGC
CAAAGCAGGCAAACAGAATCCAAAGAAGTTACATTGCCAGGAACTTAAAAAGGTGATTGAAGCCTCAGAC
ATTGTGTTAGAAGTTTTGGATGCCAGAGATCCTCTTGGTTGCAGGTGTCCTCAGATAGAAGAAGCTGTTA
TCCAGAGTGGGAGTAAGAAGCTGATACTTGTATTAAATAAGTCTGATCTAGTACCAAAGGAGAATTTGGA
GAACTGGCTAAATTATTTGAATAAAGAATTGCCAACCGTGGTGTTCAAAGCCTCAACAAACTTAAAGAAC
AGAAAGACATTCAAGATAAAAAAGAAGAAAGTTGTTCCATTCCAAAGCAAAATCTGCTGTGGCAAGGAAG
CCCTTTGGAAGCTTCTTGGAGATTTTCAGCAGTCCTGTGGAAAGGATATTCAAGTTGGAGTGATTGGTTT
CCCAAATGTGGGGAAAAGCAGTGTCATTAATAGCTTAAAACAAGAATGGATTTGCAATGTTGGGATTTCC
ATGGGACTTACAAGGAGCATGCAGATTGTCCCTTTAGACAAGCAGATCACAATCATAGACAGTCCATGCC
TAATTATCTCACCTTGTAACTCCCCCACTGCACTTGCCCTTCGGAGTCCAGCAAGCATTGAGGAACTAAG
ACCGCTGGAGGCTGCCAGTGCCATTCTGTCTCAGGCTGATAATGAACAGGTGGTGTTAAAATATACTGTC
CCTGAGTATAAGGATTCTCTGCATTTTTTTACTAAACTTGCTCAAAGAAGAGGTCTGCACCAAAAAGGTG
GAAGCCCAAATGTGGAAAGTGCTGCTAAGCTGGTGTGGTCTGAGTGGACAGGTGCCTCATTAGGTTACTA
TTGCCATCCCCCTGCATCCTGGAATCATTCTCTGCATTTTAATGAGAATATTGCAGCAGTCATGAAGAAG
GGCTTTAATCTAGAAGAACTAGAAAAGAATAATGCACACAGCATACAAGTCCTCAAGGGCCCTCATTTAA
CTAATAGAATCCTTTTTCGGTCTTCGGGCCTGACAAATGGAATACTAGACGAGAAGGACATAGTCGAAGA
ATCACCAAGACAGACAGAAGACAAACAGGATGCTGACGATCAAGAAAATGGTAGTGGTGAAAGAAATGCA
GAGATCTCAGATGTGGCCCCTGTAGAAGAGACCAGGGAGCTGTCACCTGAGCAATCAACAGCAGGTAAGC
CATCTGACGGGTCGTCTGCCTTGGATAGAGCGAGTCAAGAGGATGAAACCTATGACTTCACCACAGATTA
TATATAA

Translation (538 aa):
MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQQ
LEELKQQQKLDRQKEQERKRKLEVSPGDEQSNVETREESDEPKRKKAKAGKQNPKKLHCQELKKVIEASD
IVLEVLDARDPLGCRCPQIEEAVIQSGSKKLILVLNKSDLVPKENLENWLNYLNKELPTVVFKASTNLKN
RKTFKIKKKKVVPFQSKICCGKEALWKLLGDFQQSCGKDIQVGVIGFPNVGKSSVINSLKQEWICNVGIS
MGLTRSMQIVPLDKQITIIDSPCLIISPCNSPTALALRSPASIEELRPLEAASAILSQADNEQVVLKYTV
PEYKDSLHFFTKLAQRRGLHQKGGSPNVESAAKLVWSEWTGASLGYYCHPPASWNHSLHFNENIAAVMKK
GFNLEELEKNNAHSIQVLKGPHLTNRILFRSSGLTNGILDEKDIVEESPRQTEDKQDADDQENGSGERNA
EISDVAPVEETRELSPEQSTAGKPSDGSSALDRASQEDETYDFTTDYI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH