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Report for CCDS26977.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26977.1 Public Mus musculus 14 Fermt2 23 108 98 CCDS HistoryNCBI Gene:218952Re-query CCDS DB by CCDS ID:26977.1Re-query CCDS DB by GeneID:218952See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26977.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045905.13 ENSMUSP00000044554.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045905.13Link to Ensembl Protein Viewer:ENSMUSP00000044554.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000045905Re-query CCDS DB by Protein ID:ENSMUSP00000044554
Original member NCBI NM_146054.3 NP_666166.2 Updated not alive Link to Nucleotide Sequence:NM_146054.3Link to Protein Sequence:NP_666166.2Re-query CCDS DB by Nucleotide ID:NM_146054Re-query CCDS DB by Protein ID:NP_666166
Current member NCBI NM_146054.4 NP_666166.2 Accepted alive Link to Nucleotide Sequence:NM_146054.4Link to Protein Sequence:NP_666166.2Re-query CCDS DB by Nucleotide ID:NM_146054Re-query CCDS DB by Protein ID:NP_666166Link to BLAST:NP_666166.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666166.2 680 Q8CIB5 680 100% 0 0

Chromosomal Locations for CCDS 26977.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 45459850 45460023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45461767 45461908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45462116 45462240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45464724 45464945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45465084 45465190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45467338 45467462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45468503 45468552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45469240 45469374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45472772 45472879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45475573 45475675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45475888 45476113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45482432 45482566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45504497 45504730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 45529425 45529581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2043 nt):
ATGGCTCTGGACGGGATAAGGATGCCAGATGGCTGCTACGCGGACGGGACGTGGGAACTGAGCGTCCATG
TCACGGACCTGAACCGTGATGTCACTCTGAGAGTGACCGGGGAGGTGCACATCGGAGGGGTGATGCTGAA
GTTGGTGGAAAAACTCGATGTCAAAAAAGATTGGTCGGACCATGCTCTCTGGTGGGAAAAGAAGAGGACT
TGGCTGCTTAAGACACACTGGACCTTGGATAAGTGTGGCATCCAGGCAGATGCCAAGCTCCAGTTCACCC
CGCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTGAAAGTGAACTTCTCTGA
CCGAGTCTTCAAGGCTGTGTCTGACATCTGCAAGACTTTCAATATAAGACACCCTGAAGAACTTTCTCTC
TTAAAAAAACCCAGAGATCCCACAAAGAAAAAAAAGAAAAAGCTAGATGACCAGTCTGAAGACGAAGCGC
TTGAGCTGGAAGGACCTCTTATCATGCCTGGATCAGGAAGCATATATTCAAGCCCGGGACTTTATAGTAA
AACAATGACCCCTACTTACGACGCTCATGATGGAAGCCCTTTGTCACCAACTTCTGCCTGGTTTGGTGAC
AGTGCCCTGTCAGAAGGCAATCCTGGGATACTTGCTGTCAGTCAGCCAGTAACATCACCAGAAATACTGG
CAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAAGCAAAAACCAACCAAGGGTGGCTAGATTCCTCAAG
ATCTCTCATGGAGCAAGATGTGAAGGAGAACGAGGCCTTGCTGCTCCGATTCAAGTACTACAGCTTTTTT
GATTTGAATCCAAAGTATGATGCCATCAGAATCAATCAGCTTTACGAGCAGGCCAAGTGGGCTCTTCTCC
TAGAAGAGATCGAATGCACGGAAGAAGAGATGATGATGTTCGCAGCCTTGCAGTATCATATCAATAAGCT
GTCAATCATGACATCAGAAAATCATTTAAACAACAGTGACAAAGAAGTTGATGAAGTTGACGCTGCCCTT
TCTGACCTGGAGATCACTTTGGAAGGCGGGAAAACATCAACAATTCTGGGTGACATTACTTCAATCCCAG
AACTTGCTGACTATATTAAAGTTTTCAAGCCGAAGAAGCTGACTTTAAAGGGGTACAAGCAGTACTGGTG
CACTTTCAAAGACACGTCCATCTCCTGCTACAAGAGCCGAGAAGAGTCCAGTGGTACACCTGCTCATCAG
CTGAACCTCAGAGGATGTGAAGTTACTCCGGATGTAAACATTTCAGGCCAGAAATTTAACATAAAACTCC
TAATTCCGGTAGCAGAGGGCATGAATGAGATCTGGCTTCGCTGTGATAACGAGAAGCAGTACGCGCACTG
GATGGCAGCTTGCAGGTTAGCCTCCAAAGGCAAGACCATGGCAGACAGTTCTTACAACCTGGAAGTTCAG
AACATTCTTTCCTTCCTGAAAATGCAGCATCTGAACCCAGACCCCCAGCTGATCCCTGACCAGATCACAA
CCGACGTCAACCCCGAGTGTCTGGTGTCCCCGCGGTACCTGAAGAAGTATAAGAGCAAACAGATAACAGC
ACGGATCTTGGAGGCCCATCAAAATGTAGCCCAGATGAGCCTGATTGAAGCCAAGATGAGATTCATTCAA
GCCTGGCAGTCTCTGCCTGAGTTCGGCATCACACACTTCATTGCGAGGTTTCAAGGCGGCAAGAGAGAAG
AACTTATTGGAATTGCATACAACAGGTTGATTCGGATGGACGCCAGCACAGGTGACGCCATCAAAACCTG
GCGGTTCAGCAACATGAAGCAGTGGAATGTCAACTGGGAGATCAAGATGGTCACTGTAGAGTTTGCAGAT
GAGGTCCGGTTGTCCTTCATCTGTACCGAAGTAGACTGCAAGGTGGTCCACGAATTCATTGGTGGTTACA
TATTTCTCTCAACTCGTGCGAAAGACCAAAATGAAAGTTTAGATGAGGAGATGTTCTACAAACTCACCAG
TGGTTGGGTGTGA

Translation (680 aa):
MALDGIRMPDGCYADGTWELSVHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKRT
WLLKTHWTLDKCGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSL
LKKPRDPTKKKKKKLDDQSEDEALELEGPLIMPGSGSIYSSPGLYSKTMTPTYDAHDGSPLSPTSAWFGD
SALSEGNPGILAVSQPVTSPEILAKMFKPQALLDKAKTNQGWLDSSRSLMEQDVKENEALLLRFKYYSFF
DLNPKYDAIRINQLYEQAKWALLLEEIECTEEEMMMFAALQYHINKLSIMTSENHLNNSDKEVDEVDAAL
SDLEITLEGGKTSTILGDITSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSREESSGTPAHQ
LNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQ
NILSFLKMQHLNPDPQLIPDQITTDVNPECLVSPRYLKKYKSKQITARILEAHQNVAQMSLIEAKMRFIQ
AWQSLPEFGITHFIARFQGGKREELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMVTVEFAD
EVRLSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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