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Report for CCDS27260.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27260.1 Public Mus musculus 14 Fgf17 23 108 98 CCDS HistoryNCBI Gene:14171Re-query CCDS DB by CCDS ID:27260.1Re-query CCDS DB by GeneID:14171See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27260.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022697.6 ENSMUSP00000022697.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022697.6Link to Ensembl Protein Viewer:ENSMUSP00000022697.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000022697Re-query CCDS DB by Protein ID:ENSMUSP00000022697
Original member NCBI NM_008004.5 NP_032030.1 Updated not alive Link to Nucleotide Sequence:NM_008004.5Link to Protein Sequence:NP_032030.1Re-query CCDS DB by Nucleotide ID:NM_008004Re-query CCDS DB by Protein ID:NP_032030
Current member NCBI NM_008004.6 NP_032030.1 Accepted alive Link to Nucleotide Sequence:NM_008004.6Link to Protein Sequence:NP_032030.1Re-query CCDS DB by Nucleotide ID:NM_008004Re-query CCDS DB by Protein ID:NP_032030Link to BLAST:NP_032030.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032030.1 216 P63075 216 100% 0 0

Chromosomal Locations for CCDS 27260.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70636730 70637023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70638467 70638573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70638802 70638979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70641532 70641568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70641723 70641757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGGGAGCCGCCCGCCTGCTGCCTAACCTTACCCTGTGCTTGCAGCTATTGATTCTCTGCTGTCAAACAC
AGGGGGAGAATCACCCGTCTCCTAATTTTAACCAGTACGTGAGGGACCAGGGCGCTATGACCGACCAGCT
GAGCAGGCGGCAAATCCGTGAATACCAGCTCTACAGCCGGACCAGTGGCAAGCACGTGCAGGTCACCGGA
CGTCGCATCTCTGCCACCGCAGAGGATGGCAACAAGTTCGCCAAGCTCATCGTGGAGACAGATACATTCG
GCAGCAGAGTCCGCATCAAGGGGGCAGAGAGCGAGAAGTACATCTGTATGAACAAGAGGGGCAAGCTGAT
TGGGAAGCCGAGCGGGAAGAGCAAAGACTGCGTGTTCACCGAGATCGTACTGGAGAACAACTACACGGCC
TTCCAGAACGCCCGGCACGAGGGCTGGTTCATGGCTTTCACTCGGCAGGGCCGGCCACGCCAGGCCTCCC
GGAGCCGCCAGAACCAGCGAGAGGCCCACTTCATCAAGCGCCTCTACCAAGGCCAGCTGCCTTTTCCCAA
CCACGCTGAAAGGCAGAAGCAGTTCGAATTTGTGGGCTCCGCCCCCACTCGCAGGACCAAGCGCACTCGG
AGGCCCCAGTCCCAAACGTAG

Translation (216 aa):
MGAARLLPNLTLCLQLLILCCQTQGENHPSPNFNQYVRDQGAMTDQLSRRQIREYQLYSRTSGKHVQVTG
RRISATAEDGNKFAKLIVETDTFGSRVRIKGAESEKYICMNKRGKLIGKPSGKSKDCVFTEIVLENNYTA
FQNARHEGWFMAFTRQGRPRQASRSRQNQREAHFIKRLYQGQLPFPNHAERQKQFEFVGSAPTRRTKRTR
RPQSQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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