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Report for CCDS27589.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
27589.1 |
Public |
Mus musculus |
15 |
Lrrc14 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:223664](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:27589.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:223664](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 15 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 27589.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000036423.14 |
ENSMUSP00000049466.8 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000036423.14](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000049466.8](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000036423](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000049466](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000127208.7 |
ENSMUSP00000114921.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000127208.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000114921.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000127208](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000114921](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000155735.1 |
ENSMUSP00000115446.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000155735.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000115446.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000155735](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000115446](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000137649.7 |
ENSMUSP00000121982.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000137649.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000121982.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000137649](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000121982](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358891.1 |
NP_001345820.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358891.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345820.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358891](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345820](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345820.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358892.1 |
NP_001345821.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358892.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345821.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358892](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345821](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345821.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358893.1 |
NP_001345822.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358893.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345822.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358893](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345822](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345822.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_145471.3 |
NP_663446.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_145471.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_663446.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_145471](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_663446](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_663446.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 27589.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1482 nt): ATGCACACACTTGTGTTCCTCAGCACGCGTCAGGTCCTTCAGTGCCAGCCAGCTGCATGCCAGGCCCTGC CCCTGCTGCCCCGGGAACTCTTCCCTCTGCTCTTCAAGGTGGCCTTCATGGACAAAAAGACGCTTGTGCT GCGTGAGCTGGTGCACACGTGGCCCTTTCCCCTGCTCAGCTTCCAGCAGCTGCTGCAGGAGTGTGCCCAC TGCAGTCGAGCCCTGCTGCAGGAGCGGCTCAGCACAGAAAGCATGCAGGCTGTGATCCTGGGGCTGACAG CTCGGATTCACACTCAAGAAACAGAGGCTGGCACGCAGCCCTTGTGCAGGAAGCATGCATTGCGGGTTCT GGACATGACGGGTCTCCTGGATGATGGTGTGGAGCAGGATCCTGAAACCATGAGCATGTGGGACTGTACA GCCGCTGTAGCCAGAACGTGCATTGCCCAGCAGCAGGGTGGGACTGCCGAGCCAGGGCTGTCACCAGTCC CCGTGGAAATCCGAGTAGACCTTCGGGTAAACCGGGCCTCGTACACATTCCTTCGTGAGGCCCTCCAAAG CAGTGTGGCCAGCCCGCTGCGGCTGTGCTGCCGGGACCTGCGGGCTGAGGATCTACCCATGCGTAACACT GTGGCCCTGCTACAGCTTTTAGATGCAGGCTGTCTGCGCCGGATAGACCTGCGCTTCAATAACCTGGGCT TGCGTGGCCTGTCTGTCATTATCCCACATGTGGCCCGCTTTCAGCACTTAGCTAGCCTGAGGCTGCACTA CGTGCATGGGGACTCAAGACAGCCTTCCGTGGACGGGGAGGACAACTTTCGCTACTTTCTGGCCCAGATG GGCCGGTTTATGTGTCTTCGGGAGCTCAGCATGGGGTCTTCTCTCCTTTCAGGCAGGCTGGATCAACTGC TCAGCACCCTGCAGAGGCCCCTGGAAAGCCTAGAACTGGCCTTCTGTGCGCTCTTGCCTGAGGACCTACG CTTCCTGGCTCAGAGTTCTCATGCTGCCCATCTCAAAAAGTTGGATTTGAGTGGCAACGACCTGTCAGGC AACCAGTTGACACCCTTCCAGGGTCTGCTGCAGGCAGTAGCCACCACACTGCTGCATCTTGAGCTGACTG AGTGCCAGCTTGCTGATGCCCAGCTGTTGGCTACCCTGCCCACCCTCACTCGATGTGCCAGTCTCCGCTA CCTTGGTCTCTATGGCAACCCTTTGTCTATGGCAGGACTTAAAGAACTGCTTCGGGACTCTGTGGTACAG GCTGAGCTACGTACCGTGGTACACCCCTTCCCTGTGGACTGCTATGAGGGTCTTCCTTGGCCACCACCTG CCTCTGTCCTTCTGGAAGCCTCCATCAATGAGGAGAAGTTTGCCCGGGTGGAAGCTGAGTTACACCAACT GCTGTTAGCTTCGGGCCGTGCCCATGTGCTCTGGACCACAGACATCTATGGCCGGCTAGCTGCAGACTAT TTTAGCCTCTGA
Translation (493 aa): MHTLVFLSTRQVLQCQPAACQALPLLPRELFPLLFKVAFMDKKTLVLRELVHTWPFPLLSFQQLLQECAH CSRALLQERLSTESMQAVILGLTARIHTQETEAGTQPLCRKHALRVLDMTGLLDDGVEQDPETMSMWDCT AAVARTCIAQQQGGTAEPGLSPVPVEIRVDLRVNRASYTFLREALQSSVASPLRLCCRDLRAEDLPMRNT VALLQLLDAGCLRRIDLRFNNLGLRGLSVIIPHVARFQHLASLRLHYVHGDSRQPSVDGEDNFRYFLAQM GRFMCLRELSMGSSLLSGRLDQLLSTLQRPLESLELAFCALLPEDLRFLAQSSHAAHLKKLDLSGNDLSG NQLTPFQGLLQAVATTLLHLELTECQLADAQLLATLPTLTRCASLRYLGLYGNPLSMAGLKELLRDSVVQ AELRTVVHPFPVDCYEGLPWPPPASVLLEASINEEKFARVEAELHQLLLASGRAHVLWTTDIYGRLAADY FSL
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