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Report for CCDS27815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27815.1 Public Mus musculus 15 Dnajc22 23 108 98 CCDS HistoryNCBI Gene:72778Re-query CCDS DB by CCDS ID:27815.1Re-query CCDS DB by GeneID:72778See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27815.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061295.6 ENSMUSP00000055482.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061295.6Link to Ensembl Protein Viewer:ENSMUSP00000055482.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000061295Re-query CCDS DB by Protein ID:ENSMUSP00000055482
Original member NCBI NM_176835.2 NP_789805.1 Updated not alive Link to Nucleotide Sequence:NM_176835.2Link to Protein Sequence:NP_789805.1Re-query CCDS DB by Nucleotide ID:NM_176835Re-query CCDS DB by Protein ID:NP_789805
Current member NCBI NM_176835.3 NP_789805.1 Accepted alive Link to Nucleotide Sequence:NM_176835.3Link to Protein Sequence:NP_789805.1Re-query CCDS DB by Nucleotide ID:NM_176835Re-query CCDS DB by Protein ID:NP_789805Link to BLAST:NP_789805.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789805.1 339 Q8CHS2 339 100% 0 0

Chromosomal Locations for CCDS 27815.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99100936 99101775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99104316 99104495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1020 nt):
ATGGCCAAAGGGCTGCTGATGACCTATGTCCTTTGGGCTTTGGGGGGTCCTGTTGGGCTCCACCACCTGT
ACCTGGGAAGGGACAGCCATGCCCTGCTCTGGATGCTCACCCTGGGAGGTGGTGGGTTGGGCTGGCTCTG
GGAATTCTGGAAGCTCCCGAGCTTTGTGGCTCAAGCCAACAGAGTCCAGAGTTGGAAACAGAGGCCGGAA
GAGGAGAGACCACCTCTCAGTCTCCTTCGCTTTGCTTCCCAGATAGTAGTGGGTGTCTATTTTGGTCTTG
TGGCTCTAGTCAGCCTTTCTTCCATGGACAACTTCTATATAGTGGGCCTCCCACTGGCTGTTGGCTTAGG
GGTCTTGCTGGTAGCTGCTGTTGGTAACCAGACCTCAGACTTTAAGAATACCTTAGGAGCGGCCTTCCTC
ACGTCCCCTGTGTTCTATGGCCGCCCCATAGCCATCCTGCCTATCAGTTTGGCTGCCAGCATTACAGCCC
AGAAGCATCGACGATACAAAGCCTCAGCGGGGTCAGAGACACTTAGTGTGCGGCTCTACCGCGTGGGCTT
GGCTTACCTCGCCTTCACCGGCCCTCTGGCCTACAGTACGATGTACAACACAGCTGCCACCATTAACTAC
GTGGCAGAAACCCTGGGTTCCTTCTTGAGTTGGTTCAGCTTTTTCCCACTTCTTGGCCGCCTCGTGGAGT
CTGTCTTGCTTCTGCCTTGCCGGATCTGGTGGCTACTGGTCGGAGGTCCTGGCTTCAACAGCAGCCGGTT
CCAGGAGTGGGAAAAGCTCTATGAGTTTGTCGACAGTTTTCAGGATGAGAAACTTCAGCTGGCTCACCAG
GTTCTGGGCGTCCCAGAAGGAGCAACTAATGAAGAAATACATCGGAGTTACCGGGACCTGGTGAAAGTCT
GGCACCCAGATCACAACCGGCACCAGACGGAGGAGGCCCAGAGACACTTCCTGGAGATCCAGGCTGCGTA
TGAAGTCTTGAGTCAGCCCAAGAAGCCTAGAGCATCCTAG

Translation (339 aa):
MAKGLLMTYVLWALGGPVGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQANRVQSWKQRPE
EERPPLSLLRFASQIVVGVYFGLVALVSLSSMDNFYIVGLPLAVGLGVLLVAAVGNQTSDFKNTLGAAFL
TSPVFYGRPIAILPISLAASITAQKHRRYKASAGSETLSVRLYRVGLAYLAFTGPLAYSTMYNTAATINY
VAETLGSFLSWFSFFPLLGRLVESVLLLPCRIWWLLVGGPGFNSSRFQEWEKLYEFVDSFQDEKLQLAHQ
VLGVPEGATNEEIHRSYRDLVKVWHPDHNRHQTEEAQRHFLEIQAAYEVLSQPKKPRAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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