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Report for CCDS29295.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29295.1 Public Mus musculus 18 Napg 23 108 98 CCDS HistoryNCBI Gene:108123Re-query CCDS DB by CCDS ID:29295.1Re-query CCDS DB by GeneID:108123See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29295.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025474.13 ENSMUSP00000025474.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025474.13Link to Ensembl Protein Viewer:ENSMUSP00000025474.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000025474Re-query CCDS DB by Protein ID:ENSMUSP00000025474
Original member NCBI NM_028017.1 NP_082293.1 Updated not alive Link to Nucleotide Sequence:NM_028017.1Link to Protein Sequence:NP_082293.1Re-query CCDS DB by Nucleotide ID:NM_028017Re-query CCDS DB by Protein ID:NP_082293
Current member NCBI NM_028017.2 NP_082293.1 Accepted alive Link to Nucleotide Sequence:NM_028017.2Link to Protein Sequence:NP_082293.1Re-query CCDS DB by Nucleotide ID:NM_028017Re-query CCDS DB by Protein ID:NP_082293Link to BLAST:NP_082293.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082293.1 312 Q9CWZ7 312 100% 0 0

Chromosomal Locations for CCDS 29295.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 62977969 62978024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62980466 62980533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62982619 62982703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62983374 62983391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62984040 62984070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62986179 62986288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62986411 62986477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62986954 62987024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62991801 62991879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62994312 62994391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62994963 62995092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 62996817 62996960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGCAGCCCAGAAGATCAACGAGGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACCTGAAAACTGGTT
TTTTGAAGTGGAAGCCAGATTATGACAGTGCCGCTTCTGAATATGGGAAAGCAGCTGTTGCTTTTAAAAA
TGCCAAACAATTTGAGCAAGCAAAGGATGCCTGCCTCCGGGAAGCTGTTGCCCATGAAAATAACAGGGCT
CTTTTTCATGCTGCCAAAGCTTATGAGCAAGCTGGCATGATGCTGAAGGAGATGCAGAAGCTGCCTGAGG
CAGTGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGC
CCTGGAGCGAGCCGGAAAGCTCATAGAGAATGTAGACCCAGAGAAGGCTGTACAGCTGTATCAGCAGACT
GCCAATGTTTTTGAAAATGAGGAGCGCCTCCGACAGGCAGTTGAACTCCTAGGAAAGGCCTCCAGACTGC
TGGTACGAGGGCGGAGGTTTGATGAAGCTGCACTGTCTATTCAGAAAGAAAAAAATATTTACAAGGAAAT
TGAGAACTACCCAACTTGTTATAAGAAAACAATTGCTCAGGTCTTAGTTCATCTACACAGAAATGACTAT
GTGGCTGCAGAGAGGTGTGTCAGGGAGAGCTACAGCATACCAGGCTTTAACGGCAGTGAGGACTGTGCGG
CGCTGGAGCAGCTCCTGGAGGGCTACGACCAGCAGGACCAAGACCAAGTGTCCGAGGTCTGCAACTCGCC
CCTTTTCAAATACATGGACAATGATTACGCTAAGCTGGGCCTAAGCTTGGTGGTCCCAGGAGGAGGAATC
AAGAAGAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGCCGGCATGGCTGCTGAAGAGGAGG
AAGACGAGTACTCGGGAGGCCTGTGCTAG

Translation (312 aa):
MAAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRA
LFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQT
ANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQVLVHLHRNDY
VAAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVSEVCNSPLFKYMDNDYAKLGLSLVVPGGGI
KKKSPATPQAKPDGAAGMAAEEEEDEYSGGLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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