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Report for CCDS2944.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2944.1 Public Homo sapiens 3 CEP97 24 110 108 CCDS HistoryNCBI Gene:79598Re-query CCDS DB by CCDS ID:2944.1Re-query CCDS DB by GeneID:79598See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2944.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341893.8 ENSP00000342510.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341893.8Link to Ensembl Protein Viewer:ENSP00000342510.3Re-query CCDS DB by Nucleotide ID:ENST00000341893Re-query CCDS DB by Protein ID:ENSP00000342510
Original member Current member NCBI NM_024548.4 NP_078824.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024548.4Link to Protein Sequence:NP_078824.2Re-query CCDS DB by Nucleotide ID:NM_024548Re-query CCDS DB by Protein ID:NP_078824Link to BLAST:NP_078824.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078824.2 865 Q8IW35-1 865 100% 0 0

Chromosomal Locations for CCDS 2944.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 101724677 101724719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101726594 101726736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101727383 101727541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101728836 101728937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101731840 101731953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101732488 101732654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101755430 101755594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101757063 101757196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101757634 101758423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101762485 101762560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101764847 101765551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2598 nt):
ATGGCGGTGGCGCGCGTGGACGCGGCTTTGCCTCCCGGAGAAGGATCAGTGGTCAATTGGTCAGGACAGG
GACTACAGAAATTAGGTCCAAATTTACCCTGTGAAGCTGATATTCACACTTTGATTCTGGATAAAAATCA
GATTATTAAATTGGAAAATCTGGAGAAATGCAAACGATTAATACAGTTATCAGTAGCTAATAATCGGCTG
GTTCGGATGATGGGTGTGGCCAAGCTGACGTTGCTTCGTGTATTAAATTTGCCTCATAATAGCATTGGCT
GTGTGGAAGGGCTAAAGGAACTAGTACATCTGGAATGGCTGAATTTGGCAGGAAATAATCTTAAGGCCAT
GGAACAGATCAATAGCTGCACAGCTCTACAGCATCTCGATTTATCAGACAATAATATATCCCAGATAGGT
GATCTATCTAAATTGGTATCCCTGAAAACCCTGCTTTTACATGGAAACATCATCACCTCTCTTAGAATGG
CACCTGCTTACCTACCCAGAAGTCTTGCTATACTTTCTTTGGCAGAAAATGAAATCCGAGACTTAAATGA
GATCTCTTTTTTGGCATCCTTAACTGAATTGGAACAGTTGTCGATTATGAACAATCCTTGTGTGATGGCA
ACACCATCCATCCCAGGATTTGACTATCGGCCGTACATCGTCAGCTGGTGCCTAAACCTCAGAGTCCTAG
ATGGATATGTGATTTCTCAGAAGGAAAGTTTGAAAGCTGAATGGCTCTATAGTCAAGGCAAGGGGAGAGC
ATATCGGCCTGGCCAGCACATCCAGCTTGTCCAATATCTGGCTACAGTCTGCCCCCTCACTTCTACACTA
GGTCTTCAAACTGCAGAGGATGCCAAACTAGAGAAGATTTTGAGCAAACAGAGGTTTCACCAGAGGCAGT
TGATGAACCAAAGCCAAAATGAAGAGTTGTCTCCTCTTGTTCCTGTTGAAACAAGGGCATCCCTTATTCC
TGAGCATTCAAGCCCTGTTCAAGATTGCCAGATATCCCAGGAAAGTGAACCCGTCATTCAAGTGAATTCT
TGGGTTGGGATAAACAGTAATGATGATCAGTTATTTGCGGTTAAGAATAATTTTCCAGCCTCTGTACACA
CTACGAGATATTCTCGAAATGATCTGCACCTGGAAGACATACAGACGGATGAGGACAAGTTAAACTGTAG
TCTTCTCTCTTCAGAGTCTACTTTTATGCCAGTTGCATCAGGACTGTCTCCACTATCACCTACAGTTGAG
CTGAGGCTGCAGGGCATTAACTTGGGCCTAGAAGATGATGGTGTTGCAGATGAATCTGTGAAAGGGCTGG
AAAGCCAGGTGTTGGATAAGGAAGAGGAACAGCCTTTATGGGCTGCAAATGAGAATTCTGTTCAAATGAT
GAGAAGTGAAATCAATACAGAGGTAAATGAGAAAGCTGGACTATTACCTTGTCCTGAGCCAACAATAATC
AGTGCTATCTTGAAGGATGATAACCACAGTCTTACATTTTTTCCTGAGTCAACTGAGCAGAAACAATCAG
ACATAAAGAAACCAGAAAATACACAACCAGAAAATAAAGAAACCATATCTCAAGCAACTTCAGAGAAACT
TCCCATGATTTTAACCCAGAGATCTGTTGCTTTGGGACAAGACAAAGTTGCCCTTCAGAAATTAAATGAT
GCAGCCACCAAGCTTCAGGCCTGTTGGCGGGGATTTTATGCCAGGAACTACAACCCTCAAGCCAAAGATG
TGCGTTACGAAATCCGGCTACGCAGAATGCAAGAGCACATTGTCTGCTTAACTGATGAAATAAGGAGATT
ACGAAAAGAAAGAGATGAAGAACGTATTAAAAAATTTGTACAAGAAGAAGCTTTCAGATTCCTTTGGAAC
CAGGTAAGGTCTCTACAGGTTTGGCAACAGACAGTGGACCAGCGTCTAAGTTCCTGGCATACTGATGTTC
CTCCTATATCAAGTACTCTTGTGCCATCGAAACATCCATTATTTACCCAAAGCCAGGAGTCCTCTTGTGA
TCAAAATGCTGATTGGTTTATTGCTTCTGATGTAGCTCCTCAAGAGAAATCATTACCAGAATTTCCAGAC
TCTGGTTTTCATTCCTCTCTAACAGAACAAGTTCATTCATTGCAGCATTCTTTGGATTTTGAGAAAAGTT
CCACAGAAGGCAGTGAAAGCTCCATAATGGGGAATTCCATTGACACAGTCAGATATGGCAAAGAATCAGA
TTTAGGGGATGTTAGTGAAGAACATGGTGAATGGAATAAGGAAAGCTCAAATAACGAGCAGGACAATAGT
CTGCTTGAACAGTATTTAACTTCAGTTCAACAGCTGGAAGATGCTGATGAGAGGACCAATTTTGATACAG
AGACAAGAGATAGCAAACTTCACATTGCTTGTTTCCCAGTACAGTTAGATACATTGTCTGACGGTGCTTC
TGTAGATGAGAGTCATGGCATATCTCCTCCTTTGCAAGGTGAAATTAGCCAGACACAAGAGAATTCTAAA
TTAAATGCAGAAGTTCAGGGGCAGCAGCCAGAATGTGATTCTACATTTCAGCTATTGCATGTTGGTGTTA
CTGTGTAG

Translation (865 aa):
MAVARVDAALPPGEGSVVNWSGQGLQKLGPNLPCEADIHTLILDKNQIIKLENLEKCKRLIQLSVANNRL
VRMMGVAKLTLLRVLNLPHNSIGCVEGLKELVHLEWLNLAGNNLKAMEQINSCTALQHLDLSDNNISQIG
DLSKLVSLKTLLLHGNIITSLRMAPAYLPRSLAILSLAENEIRDLNEISFLASLTELEQLSIMNNPCVMA
TPSIPGFDYRPYIVSWCLNLRVLDGYVISQKESLKAEWLYSQGKGRAYRPGQHIQLVQYLATVCPLTSTL
GLQTAEDAKLEKILSKQRFHQRQLMNQSQNEELSPLVPVETRASLIPEHSSPVQDCQISQESEPVIQVNS
WVGINSNDDQLFAVKNNFPASVHTTRYSRNDLHLEDIQTDEDKLNCSLLSSESTFMPVASGLSPLSPTVE
LRLQGINLGLEDDGVADESVKGLESQVLDKEEEQPLWAANENSVQMMRSEINTEVNEKAGLLPCPEPTII
SAILKDDNHSLTFFPESTEQKQSDIKKPENTQPENKETISQATSEKLPMILTQRSVALGQDKVALQKLND
AATKLQACWRGFYARNYNPQAKDVRYEIRLRRMQEHIVCLTDEIRRLRKERDEERIKKFVQEEAFRFLWN
QVRSLQVWQQTVDQRLSSWHTDVPPISSTLVPSKHPLFTQSQESSCDQNADWFIASDVAPQEKSLPEFPD
SGFHSSLTEQVHSLQHSLDFEKSSTEGSESSIMGNSIDTVRYGKESDLGDVSEEHGEWNKESSNNEQDNS
LLEQYLTSVQQLEDADERTNFDTETRDSKLHIACFPVQLDTLSDGASVDESHGISPPLQGEISQTQENSK
LNAEVQGQQPECDSTFQLLHVGVTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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