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Report for CCDS29563.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29563.1 Public Mus musculus 19 Eef1g 23 108 98 CCDS HistoryNCBI Gene:67160Re-query CCDS DB by CCDS ID:29563.1Re-query CCDS DB by GeneID:67160See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29563.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052248.7 ENSMUSP00000093955.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052248.7Link to Ensembl Protein Viewer:ENSMUSP00000093955.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000052248Re-query CCDS DB by Protein ID:ENSMUSP00000093955
Original member Current member NCBI NM_026007.4 NP_080283.3 Accepted alive Link to Nucleotide Sequence:NM_026007.4Link to Protein Sequence:NP_080283.3Re-query CCDS DB by Nucleotide ID:NM_026007Re-query CCDS DB by Protein ID:NP_080283Link to BLAST:NP_080283.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080283.3 437 Q9D8N0 437 100% 0 0

Chromosomal Locations for CCDS 29563.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 8967214 8967225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8968216 8968374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8969162 8969225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8969364 8969506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8969844 8969987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8972507 8972636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8972904 8973108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8977318 8977490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8977585 8977709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8977944 8978102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1314 nt):
ATGGCGGCTGGGACCCTGTACACATACCCTGAAAATTGGAGGGCCTTCAAGGCCCTCATCGCTGCTCAGT
ACAGCGGGGCTCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCACTTTGGCCAAACCAACCGCACCCC
TGAATTTCTCCGAAAATTTCCTGCCGGCAAGGTTCCAGCATTTGAGGGTGATGATGGATTCTGTGTGTTT
GAGAGCAATGCCATTGCCTATTATGTAAGCAATGAGGAGCTGCGAGGAAGTACGCCAGAGGCGGCAGCTC
AGGTGGTGCAGTGGGTCAGCTTTGCTGACAGTGACATCGTTCCTCCAGCTAGTACCTGGGTGTTCCCCAC
CTTGGGCATTATGCACCACAACAAACAGGCCACTGAAAATGCGAAAGAGGAGGTGAAGCGAATCCTGGGG
CTGCTGGACACTCACTTGAAGACTCGAACTTTTCTAGTGGGCGAGCGAGTGACACTGGCTGATATTACAG
TTGTCTGTACCCTGTTGTGGCTCTATAAACAGGTCTTAGAGCCTTCTTTTCGCCAGGCCTTCCCCAATAC
CAACCGGTGGTTCCTTACCTGCATTAACCAGCCCCAGTTCAGGGCTATCTTGGGGGAGGTGAAGCTGTGT
GAGAAGATGGCTCAGTTTGATGCTAAGAAGTTTGCAGAGAGCCAGCCTAAAAAAGATACCCCAAGGAAAG
AAAAGGGTTCACGAGAGGAGAAACAGAAACCCCAGGCTGAGCGGAAGGAGGAAAAAAAGGCAGCTGCCCC
AGCTCCTGAGGAAGAGATGGATGAGTGTGAGCAGGCATTGGCTGCTGAGCCCAAGGCCAAGGACCCTTTC
GCTCACCTGCCCAAGAGTACCTTTGTGTTGGATGAGTTTAAGCGTAAGTACTCCAATGAGGACACCCTCT
CTGTGGCACTGCCATATTTTTGGGAGCACTTTGATAAAGATGGCTGGTCCCTGTGGTATGCCGAGTACCG
CTTCCCTGAAGAGCTGACCCAGACCTTCATGAGTTGCAACCTCATCACTGGGATGTTTCAGCGATTGGAC
AAACTGAGGAAGAATGCCTTTGCTAGTGTTATCCTCTTTGGAACCAACAACAGCAGCTCCATTTCTGGTG
TTTGGGTCTTCCGAGGCCAAGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTATGAGTCGTA
TACATGGCGGAAACTGGATCCTGGGAGCGAGGAAACCCAGACCCTGGTTCGAGAGTACTTTTCCTGGGAG
GGGACCTTCCAGCATGTGGGCAAAGCCGTCAATCAAGGCAAGATCTTCAAGTGA

Translation (437 aa):
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVF
ESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILG
LLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAILGEVKLC
EKMAQFDAKKFAESQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPF
AHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLD
KLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE
GTFQHVGKAVNQGKIFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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