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Report for CCDS3028.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3028.1 Public Homo sapiens 3 KALRN 24 110 108 CCDS HistoryNCBI Gene:8997Re-query CCDS DB by CCDS ID:3028.1Re-query CCDS DB by GeneID:8997See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3028.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291478.9 ENSP00000291478.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000291478.9Link to Ensembl Protein Viewer:ENSP00000291478.4Re-query CCDS DB by Nucleotide ID:ENST00000291478Re-query CCDS DB by Protein ID:ENSP00000291478
Original member Current member NCBI NM_007064.5 NP_008995.2 Accepted alive Link to Nucleotide Sequence:NM_007064.5Link to Protein Sequence:NP_008995.2Re-query CCDS DB by Nucleotide ID:NM_007064Re-query CCDS DB by Protein ID:NP_008995Link to BLAST:NP_008995.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008995.2 1289 O60229-4 1289 100% 0 0

Chromosomal Locations for CCDS 3028.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 124584822 124584906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124632420 124632703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124633849 124633953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124637208 124637303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124650808 124650938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124655601 124655667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124657448 124657551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124657734 124657803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124658431 124658517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124659365 124659457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124660923 124660973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124661851 124661928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124666449 124666634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124667012 124667183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124671660 124671898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124674361 124674614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124678190 124678313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124679458 124679517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124693804 124693831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124694332 124694503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124696134 124696255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124697593 124697724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124699869 124700033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124702038 124702116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124712935 124713135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124717247 124717385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124718925 124719470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3870 nt):
ATGAAGGGCGGCGACAGGGCTTACACCCGAGGTCCCTCTTTGGGGTGGCTCTTTGCTAAGTGCTGCTGTT
GCTTCCCGTGTAGAGATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGCCAA
CCTGCAGGCCCAGCCCTCCCTGAACTCCATCCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACACTCTT
AAGAAGTGGCTGACGAGTCCTGTGCGTCGGCTTAACAGCGGGAAGGCAGATGGAAACATCAAAAAGCAGA
AGAAAGTTCGCGATGGTCGGAAGAGCTTTGACCTGGGATCTCCCAAGCCTGGGGATGAAACAACCCCTCA
GGGAGACAGCGCTGATGAGAAGAGCAAGAAAGGTTGGGGTGAAGATGAGCCGGATGAAGAGTCACACACA
CCCCTCCCACCACCTATGAAGATTTTTGACAACGACCCTACACAGGATGAAATGTCCTCCTCTTTGCTAG
CAGCCCGGCAGGCTTCCACTGAAGTACCTACTGCTGCAGACCTTGTCAATGCAATAGAAAAGTTGGTCAA
AAACAAGCTGAGTCTAGAAGGAAGCTCATACCGGGGGAGCTTGAAAGACCCTGCAGGCTGCCTGAATGAG
GGGATGGCCCCACCCACACCTCCTAAAAACCCAGAAGAAGAACAGAAAGCCAAGGCCCTGAGAGGCAGGA
TGTTTGTCCTGAATGAGCTGGTACAGACAGAGAAAGACTATGTCAAGGATCTGGGCATTGTGGTGGAGGG
CTTCATGAAGAGAATAGAAGAAAAGGGTGTCCCTGAGGATATGCGAGGAAAGGACAAAATCGTGTTTGGA
AATATTCATCAGATTTATGACTGGCATAAGGATTTTTTCCTGGCGGAACTGGAAAAGTGTATCCAGGAGC
AAGACAGATTGGCACAGCTCTTTATTAAGCACGAGCGGAAGCTGCACATCTACGTGTGGTATTGTCAGAA
TAAGCCGCGCTCAGAGTACATCGTTGCTGAGTATGACGCCTACTTTGAGGAGGTAAAACAGGAGATAAAT
CAGAGGCTGACACTGAGTGACTTCCTCATCAAGCCCATTCAGAGAATAACAAAATACCAGTTGCTCCTCA
AGGACTTCCTGAGATACAGTGAGAAGGCTGGTTTGGAGTGTTCAGATATTGAGAAAGCAGTGGAGTTAAT
GTGCCTTGTTCCCAAACGCTGCAATGACATGATGAATCTAGGACGTCTGCAGGGCTTTGAGGGCACTCTG
ACTGCTCAGGGGAAGCTGCTGCAGCAGGACACATTCTATGTGATCGAGCTGGATGCAGGCATGCAGTCCC
GGACCAAAGAGAGGCGCGTGTTCCTCTTCGAGCAGATTGTCATCTTCAGTGAACTGCTCAGGAAGGGATC
CCTCACCCCTGGCTACATGTTCAAAAGGAGCATCAAGATGAATTACTTGGTCCTGGAGGAGAATGTGGAC
AATGATCCCTGCAAGTTTGCACTCATGAACAGAGAGACTTCTGAGAGGGTTGTTCTGCAAGCCGCCAACG
CTGACATCCAGCAGGCCTGGGTGCAGGACATCAATCAAGTCTTAGAAACACAGCGAGACTTTTTGAATGC
ACTGCAATCGCCCATTGAGTATCAACGGAAAGAAAGGAGCACAGCTGTGATGAGGTCTCAACCTGCCAGG
CTTCCCCAAGCCAGCCCCAGGCCCTACTCCTCTGTTCCTGCGGGCTCAGAGAAGCCCCCAAAGGGCTCCA
GCTATAACCCACCTCTGCCTCCCCTGAAGATATCTACCTCCAATGGCAGTCCAGGGTTTGAATACCACCA
GCCTGGGGACAAGTTCGAAGCCAGCAAGCAGAACGACCTGGGAGGCTGCAATGGGACCTCGTCCATGGCC
GTGATCAAAGATTACTATGCACTGAAGGAGAATGAAATCTGTGTGAGCCAAGGTGAGGTGGTCCAGGTCC
TCGCCGTCAACCAGCAGAACATGTGTCTGGTGTACCAGCCTGCCAGCGACCATTCCCCCGCCGCCGAGGG
CTGGGTCCCAGGCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATC
AAGAAGTCATGTTCATGGCATACTCTACGCATGAGAAAGCGGGCGGAAGTGGAGAACACGGGTAAAAATG
AAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGAGACGAACAGTTC
CGAGGAATCAGAGTGTGATGATCTTGACCCTAATACTAGCATGGAGATCTTAAATCCAAATTTCATCCAA
GAAGTGGCCCCAGAATTCCTTGTGCCCTTGGTGGATGTGACCTGCTTGCTTGGGGACACAGTGATACTGC
AGTGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACTTGGAAGGGTCCAGACCAGAACATCCTTGACAC
TGATAACAGCTCAGCCACATACACGGTCTCCTCTTGTGATTCTGGAGAAATCACCCTGAAGATCTGTAAT
CTGATGCCCCAAGACAGTGGGATTTATACCTGCATAGCAACAAATGACCACGGGACCACATCAACGTCTG
CAACAGTCAAAGTGCAAGGTGTTCCAGCAGCCCCTAACCGCCCCATTGCCCAGGAGAGAAGCTGCACCTC
CGTGATTCTCCGCTGGCTGCCCCCCTCCAGCACAGGAAACTGCACTATTTCTGGTTACACTGTGGAGTAC
AGAGAGGAAGGTTCTCAGATCTGGCAGCAGTCAGTGGCTTCGACCTTGGACACTTACCTCGTCATCGAAG
ACCTTAGTCCCGGGTGTCCTTATCAGTTCAGAGTCAGTGCCAGTAACCCCTGGGGAATCAGCCTTCCCAG
CGAGCCCTCGGAGTTTGTGCGACTTCCAGAATATGATGCTGCTGCTGATGGTGCCACCATTTCTTGGAAG
GAAAATTTTGACTCAGCTTACACTGAGCTGAATGAAATTGGAAGAGGCCGTTTCTCTATAGTAAAGAAAT
GCATTCACAAAGCTACCCGCAAAGATGTGGCTGTGAAATTTGTTAGCAAAAAAATGAAGAAGAAAGAACA
GGCTGCCCACGAGGCTGCCCTGCTTCAGCACCTACAGCACCCCCAGTACATCACTCTCCATGACACCTAT
GAGTCCCCCACATCCTACATCCTGATCTTGGAACTGATGGATGATGGCCGGCTCTTAGACTACCTTATGA
ATCATGATGAACTGATGGAGGAAAAAGTAGCTTTCTATATCCGAGACATCATGGAGGCTCTGCAGTACCT
TCACAACTGCAGGGTTGCACATTTGGACATAAAGCCTGAAAACCTGCTCATTGACCTACGGATTCCAGTG
CCTCGAGTGAAGCTCATTGACTTGGAGGATGCTGTCCAGATCTCGGGTCACTTCCACATTCACCACCTGC
TGGGGAACCCTGAGTTTGCTGCCCCAGAAGTCATTCAAGGCATCCCCGTCTCCCTGGGGACAGACATCTG
GAGCATCGGGGTTCTGACATATGTCATGCTGAGTGGGGTCTCCCCCTTCTTGGATGAGAGCAAAGAGGAG
ACATGTATCAACGTATGCAGGGTGGATTTCAGCTTCCCCCATGAATACTTCTGTGGTGTGAGCAATGCTG
CCAGAGATTTCATCAATGTGATCTTACAGGAAGATTTTCGGAGGCGGCCCACAGCAGCCACATGCTTGCA
GCATCCATGGCTGCAGCCCCATAATGGCAGCTACTCTAAGATCCCCCTGGACACCTCCCGCCTAGCATGC
TTCATAGAACGTCGCAAGCACCAGAATGATGTGCGGCCTATTCCCAATGTCAAGAGCTACATTGTCAACC
GGGTGAACCAAGGGACGTAG

Translation (1289 aa):
MKGGDRAYTRGPSLGWLFAKCCCCFPCRDAYSHSSSENGGKSESVANLQAQPSLNSIHSSPGPKRSTNTL
KKWLTSPVRRLNSGKADGNIKKQKKVRDGRKSFDLGSPKPGDETTPQGDSADEKSKKGWGEDEPDEESHT
PLPPPMKIFDNDPTQDEMSSSLLAARQASTEVPTAADLVNAIEKLVKNKLSLEGSSYRGSLKDPAGCLNE
GMAPPTPPKNPEEEQKAKALRGRMFVLNELVQTEKDYVKDLGIVVEGFMKRIEEKGVPEDMRGKDKIVFG
NIHQIYDWHKDFFLAELEKCIQEQDRLAQLFIKHERKLHIYVWYCQNKPRSEYIVAEYDAYFEEVKQEIN
QRLTLSDFLIKPIQRITKYQLLLKDFLRYSEKAGLECSDIEKAVELMCLVPKRCNDMMNLGRLQGFEGTL
TAQGKLLQQDTFYVIELDAGMQSRTKERRVFLFEQIVIFSELLRKGSLTPGYMFKRSIKMNYLVLEENVD
NDPCKFALMNRETSERVVLQAANADIQQAWVQDINQVLETQRDFLNALQSPIEYQRKERSTAVMRSQPAR
LPQASPRPYSSVPAGSEKPPKGSSYNPPLPPLKISTSNGSPGFEYHQPGDKFEASKQNDLGGCNGTSSMA
VIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPLTKATAAESSDGSI
KKSCSWHTLRMRKRAEVENTGKNEATGPRKPKDILGNKVSVKETNSSEESECDDLDPNTSMEILNPNFIQ
EVAPEFLVPLVDVTCLLGDTVILQCKVCGRPKPTITWKGPDQNILDTDNSSATYTVSSCDSGEITLKICN
LMPQDSGIYTCIATNDHGTTSTSATVKVQGVPAAPNRPIAQERSCTSVILRWLPPSSTGNCTISGYTVEY
REEGSQIWQQSVASTLDTYLVIEDLSPGCPYQFRVSASNPWGISLPSEPSEFVRLPEYDAAADGATISWK
ENFDSAYTELNEIGRGRFSIVKKCIHKATRKDVAVKFVSKKMKKKEQAAHEAALLQHLQHPQYITLHDTY
ESPTSYILILELMDDGRLLDYLMNHDELMEEKVAFYIRDIMEALQYLHNCRVAHLDIKPENLLIDLRIPV
PRVKLIDLEDAVQISGHFHIHHLLGNPEFAAPEVIQGIPVSLGTDIWSIGVLTYVMLSGVSPFLDESKEE
TCINVCRVDFSFPHEYFCGVSNAARDFINVILQEDFRRRPTAATCLQHPWLQPHNGSYSKIPLDTSRLAC
FIERRKHQNDVRPIPNVKSYIVNRVNQGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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