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Report for CCDS30714.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30714.1 Public Homo sapiens 1 CC2D1B 24 110 108 CCDS HistoryNCBI Gene:200014Re-query CCDS DB by CCDS ID:30714.1Re-query CCDS DB by GeneID:200014See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30714.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371586.6 ENSP00000360642.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371586.6Link to Ensembl Protein Viewer:ENSP00000360642.2Re-query CCDS DB by Nucleotide ID:ENST00000371586Re-query CCDS DB by Protein ID:ENSP00000360642
Original member Current member NCBI NM_032449.3 NP_115825.1 Accepted alive Link to Nucleotide Sequence:NM_032449.3Link to Protein Sequence:NP_115825.1Re-query CCDS DB by Nucleotide ID:NM_032449Re-query CCDS DB by Protein ID:NP_115825Link to BLAST:NP_115825.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115825.1 858 Q5T0F9-1 858 100% 0 0

Chromosomal Locations for CCDS 30714.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 52353519 52353647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52354608 52354698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52354840 52354939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52355398 52355449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52355608 52355666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52355771 52355844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52356186 52356302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52356384 52356442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52357001 52357126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52357526 52357698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52357781 52357916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52358331 52358461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52358686 52358758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52359027 52359157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52359250 52359357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52359459 52359534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52359705 52359883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52360074 52360233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52360424 52360549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52360974 52361132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52361513 52361616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52362602 52362746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52364552 52364620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2577 nt):
ATGATGCCAGGGCCAAGACCTCGGAAGGGCCCTCAGGCCAGAGGCCAAGGGGTGGCCGCTGCCAAGCAGA
TGGGGCTCTTTATGGAGTTTGGCCCTGAGGACATGCTGCTGGGCATGGATGAGGCTGAAGATGATGAGGA
CCTGGAGGCTGAGCTGCTGGCTCTCACAGGGGAAGCACAAACCACAGGCAAGAAGCCAGCACCCAAGGGG
CAGGCCCCCCTGCCCATGGCCCACATCGAGAAGTTGGCGGCAGACTGTATGCGGGATGTGGAGGAGGAGG
AGGAGGAGGAAGGGCTGGAGGAAGATGCAGAGCTGCTGACGGAGCTGCAGGAGGTCTTAGGTGTGGACGA
GGAGACTGAGCCCCTGGATGGTGATGAGGTAGCTGACCCAGGCGGCTCTGAGGAGGAGAACGGCCTAGAA
GACACTGAACCTCCAGTGCAGACAGCCGTCCTGACAGCTTCAGCCCCAGCAGCTCAGGCCGGAGCATCTC
AGGGGCTACACGCTTTGCTGGAGGAACGGATTCACAACTACCGAGAGGCTGCGGCCAGTGCCAAGGAGGC
AGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGCGCGGCCTGAAGACCTTGGAGTCGCAGCTAGCCTCTGTG
AGGAGAGGCAGAAAGATCAATGAGGATGAGATCCCACCTCCAGTGGCCTTAGGAAAGCGGCCCCTGGCCC
CCCAGGAACCAGCCAACAGGAGCCCTGAGACAGACCCTCCAGCTCCCCCTGCCTTGGAGTCAGACAACCC
CTCCCAACCTGAGACCAGCCTCCCTGGCATTTCTGCCCAGCCCGTTTCAGACTTAGACCCAGACCCGCGG
GCCCTGCTGTCATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTGGAGAGCTAG
ACCGTGCCCGAGAGCTCATGAGGATTGGGAAGAGATTCGGTGCTGTCCTGGAGGCCCTGGAGAAGGGGCA
GCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAGCCCCAGCAGGCTTCTCAGGCTCCC
ACAGCACCCTCAGTCATTCCCCCAGCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGACGTCCCAGCAA
CCCCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTACCGCGA
GGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAAGCAA
TATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCTCCAG
GATTTCCCCCCATCCCTGGCCTGGAGTCCACTATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTGGC
AGCTGCAGAGAAACTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAAGACGAGGACGAGCCTCCTGGG
CACCTGCAGGGTGAGCCCCCAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCAT
CCCAGCGCCTGCCTGAGCCCAGGGCCTCAAGTTCTAAGGAGTCACCGAGTCCATCTGTGCGGGAGCAGCT
GGCACTGCTGGAGGCACGGAAACTGCAGTATCAGCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTG
GAGCAGGCCAAAGCCTATCTGCGGGTAGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTGGCA
GACCTGTTGATCTGTCCAAGGTGCCTTCGCCCTTGACGGATGAGGAGGGTGACTTCATCCTCATCCACCA
TGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAGCAA
CAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTG
AGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGATCCTGCAGCTGGCCCAGGCTCAGGGCCTCGACCC
TCCCACCCACCACTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTCAACAGCACAGAA
ATGCATCTGATCATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATGACCTGGATG
CTTTTGTGCGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTGGTGAA
GAACACAAACTCTCCAGAATTTGATCAACTCTTCAAACTAAACATCAACCGAAACCACCGGGGCTTCAAG
AGGGTGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAGAAGCGACAAGC
TGGTTGGCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTGTGGAGGT
CCTGGATGGAAGGAAGCCCACCGGGGGGAAGCTGGAGGTGAAGGTGAGGCTGCGGGAGCCTCTGAGTGGC
CAGGATGTGCAGATGGTCACTGAGAACTGGCTGGTTCTGGAGCCCAGGGGCTTGTGA

Translation (858 aa):
MMPGPRPRKGPQARGQGVAAAKQMGLFMEFGPEDMLLGMDEAEDDEDLEAELLALTGEAQTTGKKPAPKG
QAPLPMAHIEKLAADCMRDVEEEEEEEGLEEDAELLTELQEVLGVDEETEPLDGDEVADPGGSEEENGLE
DTEPPVQTAVLTASAPAAQAGASQGLHALLEERIHNYREAAASAKEAGEAAKARRCERGLKTLESQLASV
RRGRKINEDEIPPPVALGKRPLAPQEPANRSPETDPPAPPALESDNPSQPETSLPGISAQPVSDLDPDPR
ALLSSRQREYKVAALSAKRAGELDRARELMRIGKRFGAVLEALEKGQPVDLSAMPPAPEDLKPQQASQAP
TAPSVIPPAVERVQPVMAPDVPATPVAPTESQTVLDALQQRLNKYREAGIQARSGGDERKARMHERIAKQ
YQDAIRAHRAGRKVNFAELPVPPGFPPIPGLESTMGVEEDAVAATLAAAEKLASAEDSAPADKDEDEPPG
HLQGEPPAQAPVAKKPARPTVPSSQRLPEPRASSSKESPSPSVREQLALLEARKLQYQRAALQAKRSQDL
EQAKAYLRVAKWLEAQIIQARSGRPVDLSKVPSPLTDEEGDFILIHHEDLRLSQKAEEVYAQLQKMLLEQ
QEKCLLFSKQFMHQGNVAETTRFEKLAQDRKKQLEILQLAQAQGLDPPTHHFELKTFQTVRIFSELNSTE
MHLIIVRGMNLPAPPGVTPDDLDAFVRFEFHYPNSDQAQKSKTAVVKNTNSPEFDQLFKLNINRNHRGFK
RVIQSKGIKFEIFHKGSFFRSDKLVGTAHLKLERLENECEIREIVEVLDGRKPTGGKLEVKVRLREPLSG
QDVQMVTENWLVLEPRGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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