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Report for CCDS30865.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30865.1 Public Homo sapiens 1 SPRR2B 24 110 108 CCDS HistoryNCBI Gene:6701Re-query CCDS DB by CCDS ID:30865.1Re-query CCDS DB by GeneID:6701See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30865.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368755.3 ENSP00000357744.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368755.3Link to Ensembl Protein Viewer:ENSP00000357744.1Re-query CCDS DB by Nucleotide ID:ENST00000368755Re-query CCDS DB by Protein ID:ENSP00000357744
Original member Current member NCBI NM_001017418.3 NP_001017418.1 Accepted alive Link to Nucleotide Sequence:NM_001017418.3Link to Protein Sequence:NP_001017418.1Re-query CCDS DB by Nucleotide ID:NM_001017418Re-query CCDS DB by Protein ID:NP_001017418Link to BLAST:NP_001017418.1
Original member Current member NCBI NM_001388198.1 NP_001375127.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001388198.1Link to Protein Sequence:NP_001375127.1Re-query CCDS DB by Nucleotide ID:NM_001388198Re-query CCDS DB by Protein ID:NP_001375127Link to BLAST:NP_001375127.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017418.1 72 P35325 72 100% 0 0
NP_001375127.1 72 P35325 72 100% 0 0

Chromosomal Locations for CCDS 30865.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 153070621 153070839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (219 nt):
ATGTCTTATCAACAGCAGCAGTGCAAGCAGCCCTGCCAGCCACCTCCTGTGTGCCCCACGCCAAAGTGCC
CAGAGCCATGTCCACCCCCGAAGTGCCCTGAGCCCTGCCCACCACCAAAGTGTCCACAGCCCTGCCCACC
TCAGCAGTGCCAGCAGAAATATCCTCCTGTGACACCTTCCCCACCCTGCCAGCCAAAGTATCCACCGAAG
AGCAAGTAA

Translation (72 aa):
MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPPQQCQQKYPPVTPSPPCQPKYPPK
SK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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