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Report for CCDS31090.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31090.1 Public Homo sapiens 1 OR2B11 24 110 108 CCDS HistoryNCBI Gene:127623Re-query CCDS DB by CCDS ID:31090.1Re-query CCDS DB by GeneID:127623See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31090.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641149.2 ENSP00000492892.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641149.2Link to Ensembl Protein Viewer:ENSP00000492892.1Re-query CCDS DB by Nucleotide ID:ENST00000641149Re-query CCDS DB by Protein ID:ENSP00000492892
Original member Current member EBI ENST00000641527.1 ENSP00000493421.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641527.1Link to Ensembl Protein Viewer:ENSP00000493421.1Re-query CCDS DB by Nucleotide ID:ENST00000641527Re-query CCDS DB by Protein ID:ENSP00000493421
Original member Current member NCBI NM_001004492.2 NP_001004492.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004492.2Link to Protein Sequence:NP_001004492.1Re-query CCDS DB by Nucleotide ID:NM_001004492Re-query CCDS DB by Protein ID:NP_001004492Link to BLAST:NP_001004492.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004492.1 317 Q5JQS5 317 100% 0 0

Chromosomal Locations for CCDS 31090.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247451029 247451982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGAAAAGTGACAACCATAGCTTCTTAGGGGACTCCCCTAAAGCCTTCATCCTTCTGGGTGTGTCTGACA
GGCCGTGGCTGGAACTCCCTCTCTTTGTGGTCCTCCTGCTGTCCTATGTGCTGGCCATGTTGGGGAACGT
CGCCATCATCCTGGCATCCCGGGTGGATCCTCAACTCCACAGCCCCATGTACATCTTCCTCAGTCACCTG
TCCTTCCTGGACCTCTGCTACACCACCACGACAGTCCCTCAGATGCTGGTCAACATGGGCAGTTCCCAGA
AGACCATCAGCTATGGAGGCTGCACTGTGCAATATGCAGTCTTCCACTGGCTGGGATGCACGGAGTGCAT
CGTCCTGGCCGCCATGGCCCTGGACCGCTACGTGGCCATCTGCAAGCCCCTGCACTATGCCGTTCTCATG
CACCGTGCTCTCTGTCAGCAGCTCGTGGCTCTGGCCTGGCTCAGTGGCTTCGGCAACTCCTTCGTGCAGG
TGGTCCTGACGGTGCAATTGCCATTCTGCGGGCGGCAGGTGCTGAACAACTTTTTCTGTGAGGTGCCGGC
CGTGATCAAGCTGTCGTGTGCTGACACCGCTGTGAATGACACCATACTGGCTGTGCTGGTGGCCTTCTTC
GTGTTGGTGCCCCTGGCTCTCATCCTTCTCTCCTATGGCTTTATTGCCCGGGCAGTGCTCAGGATCCAGT
CCTCCAAGGGACGACACAAGGCCTTTGGGACGTGTTCCTCCCACCTGATGATCGTCTCCCTCTTCTACCT
ACCTGCGATTTACATGTATCTGCAGCCCCCTTCCAGCTACTCCCAAGAGCAGGGCAAATTTATTTCTCTC
TTCTATTCCATAATCACCCCCACTCTCAATCCCTTCACCTACACCCTGAGAAATAAAGATATGAAGGGGG
CTCTGAGGAGACTTCTGGCCAGGATCTGGAGGCTCTGTGGATGA

Translation (317 aa):
MKSDNHSFLGDSPKAFILLGVSDRPWLELPLFVVLLLSYVLAMLGNVAIILASRVDPQLHSPMYIFLSHL
SFLDLCYTTTTVPQMLVNMGSSQKTISYGGCTVQYAVFHWLGCTECIVLAAMALDRYVAICKPLHYAVLM
HRALCQQLVALAWLSGFGNSFVQVVLTVQLPFCGRQVLNNFFCEVPAVIKLSCADTAVNDTILAVLVAFF
VLVPLALILLSYGFIARAVLRIQSSKGRHKAFGTCSSHLMIVSLFYLPAIYMYLQPPSSYSQEQGKFISL
FYSIITPTLNPFTYTLRNKDMKGALRRLLARIWRLCG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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