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Report for CCDS31378.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31378.1 Public Homo sapiens 11 OR51B5 24 110 108 CCDS HistoryNCBI Gene:282763Re-query CCDS DB by CCDS ID:31378.1Re-query CCDS DB by GeneID:282763See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31378.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300773.3 ENSP00000300773.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300773.3Link to Ensembl Protein Viewer:ENSP00000300773.2Re-query CCDS DB by Nucleotide ID:ENST00000300773Re-query CCDS DB by Protein ID:ENSP00000300773
Original member Current member NCBI NM_001005567.3 NP_001005567.2 Accepted alive Link to Nucleotide Sequence:NM_001005567.3Link to Protein Sequence:NP_001005567.2Re-query CCDS DB by Nucleotide ID:NM_001005567Re-query CCDS DB by Protein ID:NP_001005567Link to BLAST:NP_001005567.2
Original member Current member NCBI NM_001395252.1 NP_001382181.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395252.1Link to Protein Sequence:NP_001382181.1Re-query CCDS DB by Nucleotide ID:NM_001395252Re-query CCDS DB by Protein ID:NP_001382181Link to BLAST:NP_001382181.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005567.2 312 Q9H339 312 100% 0 0
NP_001382181.1 312 Q9H339 312 100% 0 0

Chromosomal Locations for CCDS 31378.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 5342586 5343524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGTCGTCCAGCGGCAGCTCCCATCCCTTCCTATTGACTGGTTTTCCAGGCTTGGAGGAAGCTCATCACT
GGATTTCCGTATTTTTCTTGTTCATGTATATATCCATCCTTTTTGGCAATGGCACCCTCCTTCTTCTCAT
TAAGGAAGATCACAATCTTCATGAGCCCATGTACTTCTTTCTGGCCATGCTGGCTGCCACAGACCTGGGG
CTGGCCCTGACCACAATGCCCACGGTGCTGGGAGTCCTCTGGCTGGATCACAGGGAGATTGGAAGTGCGG
CCTGCTTTTCCCAGGCCTACTTTATACACTCACTTTCCTTTCTCGAGTCTGGCATTCTGCTTGCCATGGC
CTATGACCGTTTTATTGCCATCTGCAACCCTCTTAGATATACCTCTGTACTTACTAATACTCGAGTAGTG
AAGATTGGGCTGGGAGTTCTGATGAGGGGATTTGTATCCGTTGTTCCCCCAATCAGGCCCCTCTATTTTT
TTCTGTATTGTCACTCCCATGTTCTTTCACATGCATTCTGCCTTCACCAGGATGTCATTAAACTCGCCTG
TGCTGATACCACCTTCAACCGACTGTACCCAGCTGTGCTTGTAGTCTTTATATTTGTGCTGGATTATCTG
ATTATCTTCATCTCCTATGTGTTGATACTCAAGACTGTCCTGAGCATTGCCTCCAGAGAGGAGAGGGCCA
AGGCTCTCATTACCTGTGTCTCCCATATCTGCTGTGTCCTGGTTTTTTATGTCACAGTGATTGGATTGTC
TCTGATTCATCGTTTTGGAAAGCAGGTTCCACATATTGTTCACCTCATTATGAGCTATGCCTATTTTCTG
TTCCCTCCACTAATGAATCCTATAACATATAGTGTCAAGACCAAGCAGATTCAGAATGCCATTCTTCACC
TTTTTACTACCCATAGAATTGGAACCTGA

Translation (312 aa):
MSSSGSSHPFLLTGFPGLEEAHHWISVFFLFMYISILFGNGTLLLLIKEDHNLHEPMYFFLAMLAATDLG
LALTTMPTVLGVLWLDHREIGSAACFSQAYFIHSLSFLESGILLAMAYDRFIAICNPLRYTSVLTNTRVV
KIGLGVLMRGFVSVVPPIRPLYFFLYCHSHVLSHAFCLHQDVIKLACADTTFNRLYPAVLVVFIFVLDYL
IIFISYVLILKTVLSIASREERAKALITCVSHICCVLVFYVTVIGLSLIHRFGKQVPHIVHLIMSYAYFL
FPPLMNPITYSVKTKQIQNAILHLFTTHRIGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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