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Report for CCDS31439.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31439.1 Public Homo sapiens 11 SAAL1 24 110 108 CCDS HistoryNCBI Gene:113174Re-query CCDS DB by CCDS ID:31439.1Re-query CCDS DB by GeneID:113174See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31439.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000524803.6 ENSP00000432487.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000524803.6Link to Ensembl Protein Viewer:ENSP00000432487.1Re-query CCDS DB by Nucleotide ID:ENST00000524803Re-query CCDS DB by Protein ID:ENSP00000432487
Original member Current member NCBI NM_138421.3 NP_612430.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138421.3Link to Protein Sequence:NP_612430.2Re-query CCDS DB by Nucleotide ID:NM_138421Re-query CCDS DB by Protein ID:NP_612430Link to BLAST:NP_612430.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612430.2 474 Q96ER3 474 100% 0 0

Chromosomal Locations for CCDS 31439.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 18080399 18080491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18081411 18081503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18083535 18083731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18086866 18087054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18087143 18087225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18089330 18089510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18090175 18090290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18090434 18090493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18092245 18092324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18096771 18096854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18103233 18103346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18105907 18106041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1425 nt):
ATGGACCGCAACCCCTCGCCGCCGCCGCCGGGTCGCGACAAGGAGGAGGAGGAGGAGGTGGCCGGTGGAG
ACTGCATAGGGAGCACGGTCTACAGCAAACACTGGCTCTTCGGCGTCCTCAGCGGACTCATCCAGATTGT
TAGCCCTGAAAACACCAAATCTAGCTCAGATGATGAGGAGCAGCTGACGGAGCTTGATGAAGAAATGGAG
AATGAAATTTGCAGAGTATGGGATATGTCAATGGATGAGGACGTGGCTTTATTTCTCCAAGAATTTAATG
CTCCTGATATATTCATGGGAGTACTGGCCAAGTCCAAGTGTCCTCGATTAAGAGAAATCTGTGTGGGAAT
TTTAGGTAATATGGCCTGTTTCCAGGAGATATGTGTGTCCATCAGCAGTGATAAAAATCTTGGGCAGGTG
TTATTGCACTGTTTGTATGATTCAGACCCACCTACTCTGCTGGAAACAAGCAGGTTGTTGCTTACTTGCC
TTTCCCAGGCAGAAGTGGCCAGTGTTTGGGTTGAAAGGATCCAGGAACATCCAGCTATTTATGATAGCAT
TTGCTTCATTATGTCAAGTTCAACAAATGTTGACTTGCTGGTGAAGGTGGGGGAGGTTGTGGACAAGCTC
TTTGATTTGGATGAGAAACTAATGTTAGAATGGGTCAGAAATGGGGCTGCTCAGCCTCTGGACCAACCCC
AGGAAGAGTCTGAAGAGCAGCCAGTGTTTCGGCTTGTGCCCTGTATACTTGAAGCTGCCAAACAAGTACG
TTCTGAAAATCCAGAATGGCTTGATGTTTACATGCACATTTTACAACTGCTTACTACAGTGGATGATGGA
ATTCAAGCAATTGTACATTGTCCTGACACTGGAAAAGACATTTGGAATTTACTTTTTGACCTGGTCTGCC
ATGAATTCTGCCAGTCTGATGATCCACCCATCATTCTTCAAGAACAGAAAACAGTGCTAGCCTCTGTTTT
TTCAGTGTTGTCTGCCATCTATGCCTCACAGACTGAGCAAGAGTATCTAAAGATAGAAAAAGTAGATCTT
CCTCTAATTGACAGCCTCATTCGGGTCTTACAAAATATGGAACAGTGTCAGAAAAAACCAGAGAACTCGG
CAGAGTCTAACACAGAGGAAACTAAAAGGACTGATTTAACCCAAGATGATTTCCACTTGAAAATCTTAAA
GGATATTTTATGTGAATTTCTTTCTAATATTTTTCAGGCATTAACAAAGGAGACGGTGGCTCAGGGAGTA
AAGGAAGGCCAGTTGAGCAAACAGAAGTGTTCCTCTGCATTTCAAAACCTTCTTCCTTTCTATAGCCCTG
TGGTGGAAGATTTTATTAAAATCCTACGTGAAGTTGATAAGGCGCTTGCTGATGACTTGGAAAAAAACTT
CCCAAGTTTGAAGGTTCAGACTTAA

Translation (474 aa):
MDRNPSPPPPGRDKEEEEEVAGGDCIGSTVYSKHWLFGVLSGLIQIVSPENTKSSSDDEEQLTELDEEME
NEICRVWDMSMDEDVALFLQEFNAPDIFMGVLAKSKCPRLREICVGILGNMACFQEICVSISSDKNLGQV
LLHCLYDSDPPTLLETSRLLLTCLSQAEVASVWVERIQEHPAIYDSICFIMSSSTNVDLLVKVGEVVDKL
FDLDEKLMLEWVRNGAAQPLDQPQEESEEQPVFRLVPCILEAAKQVRSENPEWLDVYMHILQLLTTVDDG
IQAIVHCPDTGKDIWNLLFDLVCHEFCQSDDPPIILQEQKTVLASVFSVLSAIYASQTEQEYLKIEKVDL
PLIDSLIRVLQNMEQCQKKPENSAESNTEETKRTDLTQDDFHLKILKDILCEFLSNIFQALTKETVAQGV
KEGQLSKQKCSSAFQNLLPFYSPVVEDFIKILREVDKALADDLEKNFPSLKVQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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