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Report for CCDS31692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31692.1 Public Homo sapiens 11 TBCEL 24 110 108 CCDS HistoryNCBI Gene:219899Re-query CCDS DB by CCDS ID:31692.1Re-query CCDS DB by GeneID:219899See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31692.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000422003.6 ENSP00000403925.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000422003.6Link to Ensembl Protein Viewer:ENSP00000403925.2Re-query CCDS DB by Nucleotide ID:ENST00000422003Re-query CCDS DB by Protein ID:ENSP00000403925
Original member Current member EBI ENST00000529397.5 ENSP00000437184.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529397.5Link to Ensembl Protein Viewer:ENSP00000437184.1Re-query CCDS DB by Nucleotide ID:ENST00000529397Re-query CCDS DB by Protein ID:ENSP00000437184
Original member Current member EBI ENST00000683345.1 ENSP00000507873.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683345.1Link to Ensembl Protein Viewer:ENSP00000507873.1Re-query CCDS DB by Nucleotide ID:ENST00000683345Re-query CCDS DB by Protein ID:ENSP00000507873
Original member Current member NCBI NM_001130047.3 NP_001123519.1 Accepted alive Link to Nucleotide Sequence:NM_001130047.3Link to Protein Sequence:NP_001123519.1Re-query CCDS DB by Nucleotide ID:NM_001130047Re-query CCDS DB by Protein ID:NP_001123519Link to BLAST:NP_001123519.1
Original member Current member NCBI NM_001363644.2 NP_001350573.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001363644.2Link to Protein Sequence:NP_001350573.1Re-query CCDS DB by Nucleotide ID:NM_001363644Re-query CCDS DB by Protein ID:NP_001350573Link to BLAST:NP_001350573.1
Original member Current member NCBI NM_152715.5 NP_689928.3 Accepted alive Link to Nucleotide Sequence:NM_152715.5Link to Protein Sequence:NP_689928.3Re-query CCDS DB by Nucleotide ID:NM_152715Re-query CCDS DB by Protein ID:NP_689928Link to BLAST:NP_689928.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123519.1 424 Q5QJ74 424 100% 0 0
NP_001350573.1 424 Q5QJ74 424 100% 0 0
NP_689928.3 424 Q5QJ74 424 100% 0 0

Chromosomal Locations for CCDS 31692.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 121045691 121045823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 121047528 121047667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 121053551 121053732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 121055052 121055308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 121058345 121058471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 121059969 121060085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 121086778 121087096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1275 nt):
ATGGATCAACCTAGTGGAAGAAGTTTCATGCAAGTATTATGTGAAAAATATAGTCCTGAAAATTTTCCTT
ATCGCCGTGGCCCGGGGATGGGAGTCCATGTCCCAGCCACACCTCAGGGCTCTCCTATGAAAGATCGCCT
CAACCTCCCAAGTGTACTAGTGTTGAACAGCTGTGGAATAACCTGTGCAGGAGATGAAAAAGAAATTGCT
GCTTTCTGCGCTCATGTGTCGGAACTAGATCTTTCTGACAACAAACTCGAAGACTGGCATGAGGTCAGTA
AAATTGTGTCAAATGTTCCTCAGTTGGAGTTTCTAAACCTGAGTTCCAACCCTCTGAATTTGTCGGTTTT
AGAAAGAACATGTGCTGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGG
GAGACGGTCCACATGATACTACAGGAGTTACCAGATTTGGAGGAGCTCTTCCTGTGCCTTAATGACTATG
AAACAGTGTCTTGTCCTTCTATTTGCTGTCATTCTCTTAAGCTACTACATATAACAGACAATAACCTCCA
AGACTGGACTGAAATACGAAAGTTAGGAGTTATGTTTCCTTCACTGGATACCCTCGTCCTGGCCAACAAT
CATTTGAATGCTATTGAGGAGCCTGATGATTCATTGGCCAGGTTGTTTCCTAATCTTCGATCCATCAGCC
TCCACAAGTCAGGTTTGCAGTCCTGGGAAGACATTGATAAACTAAATTCATTTCCCAAACTGGAAGAAGT
GAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGA
TTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGATGGTGAACGAGAAGATTCTGAGAGATTTT
TTATTCGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCATTCAGGTATCATGAACTGATCACTAAATA
TGGGAAGTTGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTT
AACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACAGTGGCAGAACTAAAGAAACAGTTAAAAA
CTCTAGTACAATTACCCACAAGCAACATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGGCCCAGA
GGAAATGAAGTACAGCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAGATAAAATTTACGTGGAA
TCCAAAACAAAATAA

Translation (424 aa):
MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHVPATPQGSPMKDRLNLPSVLVLNSCGITCAGDEKEIA
AFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLERTCAGSFSGVRKLVLNNSKASW
ETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANN
HLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIAR
LPSVSKLNGSVVTDGEREDSERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEVHF
NDQVEEMSIRLDQTVAELKKQLKTLVQLPTSNMLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIYVE
SKTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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