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Report for CCDS31717.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31717.1 Public Homo sapiens 11 SRPRA 24 110 108 CCDS HistoryNCBI Gene:6734Re-query CCDS DB by CCDS ID:31717.1Re-query CCDS DB by GeneID:6734See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31717.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332118.11 ENSP00000328023.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332118.11Link to Ensembl Protein Viewer:ENSP00000328023.5Re-query CCDS DB by Nucleotide ID:ENST00000332118Re-query CCDS DB by Protein ID:ENSP00000328023
Original member Current member NCBI NM_003139.4 NP_003130.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003139.4Link to Protein Sequence:NP_003130.2Re-query CCDS DB by Nucleotide ID:NM_003139Re-query CCDS DB by Protein ID:NP_003130Link to BLAST:NP_003130.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003130.2 638 P08240-1 638 100% 0 0

Chromosomal Locations for CCDS 31717.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 126263916 126264044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126264191 126264289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126264376 126264539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126264959 126265172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126265268 126265440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126265737 126265823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126265963 126266081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126266187 126266278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126266476 126266629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126266763 126266922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126267175 126267335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126267549 126267712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126268003 126268086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 126268688 126268804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1917 nt):
ATGCTCGACTTCTTCACCATTTTCTCCAAGGGCGGGCTTGTGCTCTGGTGCTTCCAGGGCGTTAGCGACT
CATGCACCGGACCCGTTAACGCGTTGATTCGTTCCGTGCTGCTGCAGGAACGGGGAGGTAACAACTCCTT
CACCCATGAGGCACTCACACTCAAGTATAAACTGGACAACCAGTTTGAGCTGGTGTTTGTGGTTGGTTTT
CAGAAGATCCTGACACTGACATATGTAGACAAATTGATAGATGACGTGCATCGGCTGTTTCGGGACAAGT
ACCGCACAGAGATCCAACAGCAAAGTGCTTTAAGTTTATTAAATGGCACTTTTGATTTCCAAAATGACTT
CCTGCGGCTCCTTCGTGAAGCAGAGGAGAGCAGTAAGATCCGTGCTCCCACTACCATGAAGAAATTTGAA
GATTCTGAAAAGGCCAAGAAACCTGTGAGGTCCATGATTGAGACACGGGGGGAAAAGCCCAAGGAAAAAG
CAAAGAATAGCAAAAAAAAGGGGGCCAAGAAGGAAGGTTCTGATGGTCCTTTGGCTACCAGCAAACCAGT
CCCTGCAGAAAAGTCAGGTCTTCCAGTGGGTCCTGAGAACGGAGTAGAACTTTCCAAAGAGGAGCTGATC
CGCAGGAAGCGCGAGGAGTTCATTCAGAAGCATGGGAGGGGTATGGAGAAGTCCAACAAGTCCACGAAGT
CAGATGCTCCAAAGGAGAAGGGCAAAAAAGCACCCCGGGTGTGGGAACTGGGTGGCTGTGCTAACAAAGA
AGTGTTGGATTACAGTACTCCCACCACCAATGGAACCCCTGAGGCTGCCTTGTCTGAGGACATCAACCTG
ATTCGAGGGACTGGGTCTGGGGGGCAGCTTCAGGATCTGGACTGCAGCAGCTCTGATGACGAAGGGGCTG
CTCAAAACTCTACCAAACCTAGTGCGACCAAGGGAACACTGGGTGGCATGTTTGGTATGCTGAAGGGCCT
TGTGGGTTCAAAGAGCTTGAGTCGTGAAGACATGGAATCTGTGCTGGACAAGATGCGTGATCATCTCATT
GCTAAGAACGTGGCTGCAGACATTGCCGTCCAGCTCTGTGAATCTGTTGCCAACAAGTTGGAAGGGAAGG
TGATGGGGACGTTCAGCACGGTGACTTCCACAGTAAAGCAAGCCCTACAGGAGTCCCTGGTGCAGATTCT
GCAGCCACAGCGTCGTGTAGACATGCTCCGGGACATCATGGATGCCCAGCGTCGCCAGCGCCCTTATGTC
GTCACCTTCTGCGGCGTTAATGGAGTGGGGAAATCTACTAATCTTGCCAAGATTTCCTTCTGGTTGTTAG
AGAATGGCTTCAGTGTCCTCATTGCTGCCTGTGATACATTTCGTGCTGGGGCCGTGGAGCAGCTGCGTAC
ACACACCCGGCGTTTGAGTGCCCTACACCCTCCAGAGAAGCATGGTGGCCGCACCATGGTGCAGTTGTTT
GAAAAGGGCTATGGCAAGGATGCTGCTGGCATTGCCATGGAAGCCATTGCTTTTGCACGTAACCAAGGCT
TTGACGTGGTGCTGGTGGACACGGCAGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAA
ACTCATTACTGTCAATACACCTGATTTGGTGCTGTTTGTAGGAGAAGCCTTAGTAGGCAATGAAGCCGTG
GACCAGCTGGTCAAGTTCAACAGAGCCTTGGCTGACCATTCTATGGCTCAGACACCTCGGCTCATTGATG
GCATTGTTCTTACCAAATTTGATACCATTGATGACAAGGTGGGAGCTGCTATTTCTATGACGTACATCAC
AAGCAAACCCATCGTCTTTGTGGGCACCGGCCAGACCTACTGTGACCTACGCAGCCTCAATGCCAAGGCT
GTGGTGGCTGCCCTCATGAAGGCTTAA

Translation (638 aa):
MLDFFTIFSKGGLVLWCFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGF
QKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQNDFLRLLREAEESSKIRAPTTMKKFE
DSEKAKKPVRSMIETRGEKPKEKAKNSKKKGAKKEGSDGPLATSKPVPAEKSGLPVGPENGVELSKEELI
RRKREEFIQKHGRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGTPEAALSEDINL
IRGTGSGGQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLI
AKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYV
VTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLF
EKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAV
DQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKA
VVAALMKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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