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Report for CCDS32003.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32003.1 Public Homo sapiens 13 METTL21C 24 110 108 CCDS HistoryNCBI Gene:196541Re-query CCDS DB by CCDS ID:32003.1Re-query CCDS DB by GeneID:196541See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32003.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267273.7 ENSP00000267273.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267273.7Link to Ensembl Protein Viewer:ENSP00000267273.5Re-query CCDS DB by Nucleotide ID:ENST00000267273Re-query CCDS DB by Protein ID:ENSP00000267273
Original member Current member NCBI NM_001010977.3 NP_001010977.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010977.3Link to Protein Sequence:NP_001010977.1Re-query CCDS DB by Nucleotide ID:NM_001010977Re-query CCDS DB by Protein ID:NP_001010977Link to BLAST:NP_001010977.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010977.1 264 Q5VZV1 264 100% 0 0

Chromosomal Locations for CCDS 32003.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 102686031 102686425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 102686940 102687057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 102690813 102690964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 102694369 102694498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGGACGTGTGTCTGAGCTCCGCGCAGCAGCCTGGGCGCCGGGGGGAAGGACTCAGCTCCCCGGGTGGCT
GGTTAGAGGCTGAGAAGAAGGGGGCTCCGCAGAAAGACAGCACCGGGGGAGTCCTAGAAGAATCCAACAA
GATAGAACCATCTCTTCATAGCCTCCAGAAATTTGTTCCTACAGATTACGCCAGCTACACTCAGGAGCAT
TATCGGTTTGCAGGAAAGGAGATTGTCATCCAGGAATCCATAGAGAGTTACGGAGCGGTGGTGTGGCCAG
GGGCTATGGCTTTGTGTCAATACTTGGAGGAACATGCCGAGGAATTGAATTTCCAAGATGCAAAAATACT
TGAAATTGGTGCCGGACCAGGCCTTGTTTCCATTGTGGCCAGTATTTTAGGAGCTCAAGTCACAGCAACA
GATTTGCCTGATGTCCTGGGAAACCTTCAATACAATCTTTTAAAAAACACACTACAATGTACAGCACATC
TGCCTGAAGTGAAAGAACTGGTATGGGGGGAAGACCTGGACAAAAACTTTCCCAAGTCAGCTTTTTACTA
TGATTACGTCCTAGCCTCAGATGTGGTCTACCATCACTACTTCCTGGACAAGCTGCTCACCACCATGGTG
TACCTTTCCCAGCCAGGGACGGTGCTGCTTTGGGCAAACAAATTCAGGTTCAGCACCGACTATGAATTTT
TAGATAAATTCAAGCAAGTTTTTGACACAACACTGTTGGCTGAATATCCAGAGTCATCAGTCAAACTTTT
TAAGGGGATACTAAAATGGGACTAA

Translation (264 aa):
MDVCLSSAQQPGRRGEGLSSPGGWLEAEKKGAPQKDSTGGVLEESNKIEPSLHSLQKFVPTDYASYTQEH
YRFAGKEIVIQESIESYGAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQVTAT
DLPDVLGNLQYNLLKNTLQCTAHLPEVKELVWGEDLDKNFPKSAFYYDYVLASDVVYHHYFLDKLLTTMV
YLSQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAEYPESSVKLFKGILKWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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