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Report for CCDS32106.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32106.1 Public Homo sapiens 14 DCAF5 24 110 108 CCDS HistoryNCBI Gene:8816Re-query CCDS DB by CCDS ID:32106.1Re-query CCDS DB by GeneID:8816See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32106.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341516.10 ENSP00000341351.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341516.10Link to Ensembl Protein Viewer:ENSP00000341351.5Re-query CCDS DB by Nucleotide ID:ENST00000341516Re-query CCDS DB by Protein ID:ENSP00000341351
Original member Current member NCBI NM_003861.3 NP_003852.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003861.3Link to Protein Sequence:NP_003852.1Re-query CCDS DB by Nucleotide ID:NM_003861Re-query CCDS DB by Protein ID:NP_003852Link to BLAST:NP_003852.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003852.1 942 Q96JK2-1 942 100% 0 0

Chromosomal Locations for CCDS 32106.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 69053857 69055611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69062384 69062511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69075345 69075411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69091674 69091887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69116366 69116495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69118139 69118278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69119194 69119230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69122217 69122360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69152765 69152978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2829 nt):
ATGAAGAGGAGAGCTGGCCTGGGGGGCAGCATGAGGTCAGTGGTGGGCTTCTTGTCCCAGCGGGGCTTGC
ATGGGGACCCCCTGCTCACTCAGGACTTTCAGAGGAGACGCCTGCGGGGCTGCAGAAACCTCTACAAGAA
GGACCTCCTCGGCCACTTCGGCTGTGTCAATGCCATTGAATTCTCCAACAATGGAGGCCAGTGGCTGGTC
TCAGGAGGAGATGACCGCCGGGTTCTGCTATGGCACATGGAACAAGCCATCCACTCCAGGGTCAAGCCCA
TACAGCTGAAAGGAGAGCACCATTCCAACATTTTTTGCCTGGCTTTCAACAGTGGGAACACTAAAGTGTT
CTCTGGAGGCAATGATGAGCAAGTTATCCTCCATGATGTTGAAAGCAGTGAGACATTGGACGTGTTTGCT
CATGAAGATGCAGTATATGGCTTGTCTGTGAGCCCAGTGAATGACAACATTTTTGCCAGTTCCTCAGATG
ATGGCCGGGTTCTCATTTGGGACATTCGGGAATCCCCCCATGGAGAGCCCTTCTGCCTGGCAAACTATCC
ATCAGCCTTTCATAGTGTCATGTTTAACCCTGTGGAGCCCAGGTTGTTGGCCACAGCCAATTCAAAGGAA
GGAGTGGGACTCTGGGACATTCGAAAACCTCAGAGTTCTCTCCTGCGCTATGGTGGAAACCTGTCCCTCC
AAAGTGCCATGAGTGTACGATTCAACAGCAACGGGACCCAGCTCCTGGCCCTGAGGCGACGCCTGCCCCC
TGTGCTCTATGACATCCATTCCCGCCTGCCTGTGTTTCAGTTTGACAATCAGGGTTACTTCAACTCATGC
ACCATGAAAAGCTGCTGTTTTGCAGGAGATCGTGACCAGTATATCCTTTCGGGCTCTGATGACTTCAACC
TGTACATGTGGAGAATTCCTGCAGATCCAGAAGCAGGTGGCATTGGTAGGGTGGTCAACGGAGCCTTCAT
GGTGCTGAAAGGGCATCGATCTATTGTTAACCAAGTCCGATTTAATCCCCACACCTACATGATCTGCTCT
TCTGGTGTAGAAAAGATTATCAAGATCTGGAGCCCATACAAGCAGCCAGGATGTACTGGAGACCTCGACG
GTCGGATTGAGGACGATTCCCGCTGCCTCTATACCCATGAAGAGTACATCAGCCTTGTGCTGAACAGTGG
GAGTGGCCTGTCGCATGACTACGCCAACCAGTCGGTCCAGGAAGACCCCCGGATGATGGCCTTCTTTGAC
TCACTGGTACGCCGAGAGATCGAGGGCTGGAGCTCTGACTCAGACAGTGACCTCAGTGAGAGTACTATCC
TCCAACTGCACGCTGGGGTCAGCGAGCGCTCAGGCTACACTGACTCAGAGTCTTCGGCCTCATTGCCTCG
CTCCCCGCCTCCCACAGTAGATGAGTCTGCCGACAACGCCTTCCACCTGGGGCCCCTGCGGGTCACCACC
ACAAACACAGTAGCCTCAACTCCACCAACACCCACGTGTGAGGATGCAGCCTCTCGCCAGCAGCGTCTGT
CTGCTCTGCGGCGCTACCAAGACAAACGCCTCCTGGCCCTTTCCAATGAGTCCGATTCTGAGGAGAATGT
CTGTGAGGTGGAACTAGACACAGATCTCTTTCCCCGGCCACGGTCACCCAGCCCCGAAGATGAATCCAGC
AGTTCCAGCAGCTCTAGCAGCTCTGAGGATGAGGAGGAGCTGAATGAACGCCGAGCCTCTACCTGGCAGC
GGAATGCCATGCGGCGCCGACAGAAGACAACCCGAGAAGACAAGCCCAGTGCCCCAATCAAGCCCACCAA
CACTTACATTGGAGAAGACAACTATGATTACCCCCAGATCAAAGTGGATGACCTCTCCTCCTCCCCAACC
TCGTCCCCTGAGCGGAGCACTTCCACGCTAGAGATTCAACCAAGCCGGGCATCACCAACTTCTGACATAG
AATCAGTTGAGCGAAAAATTTATAAAGCTTACAAGTGGCTCCGCTACTCTTATATCTCCTACTCAAATAA
CAAAGATGGAGAGACCTCCTTGGTGACCGGGGAGGCAGATGAAGGGAGAGCAGGAACCAGCCACAAAGAC
AACCCAGCCCCTTCTTCCAGTAAGGAAGCCTGTCTAAACATAGCAATGGCCCAGAGGAACCAGGACCTGC
CACCTGAAGGCTGCAGCAAGGACACTTTTAAAGAAGAGACTCCTAGAACTCCCAGCAATGGCCCAGGCCA
TGAGCACAGCAGCCATGCTTGGGCAGAGGTGCCAGAGGGTACCTCTCAGGACACTGGCAATAGCGGCTCT
GTAGAGCACCCTTTTGAAACCAAGAAGCTCAATGGAAAGGCCCTGAGCAGTCGGGCTGAGGAGCCGCCTT
CTCCTCCTGTCCCCAAGGCATCTGGCTCCACTCTCAACAGCGGGTCTGGCAACTGTCCCAGGACCCAGTC
TGATGACAGTGAGGAGAGGAGCCTCGAAACCATCTGTGCCAACCACAACAATGGACGCTTACACCCTCGT
CCCCCTCACCCTCACAATAACGGGCAGAACTTGGGGGAGCTGGAGGTGGTGGCCTACTCTTCCCCAGGAC
ACTCAGACACTGACCGTGATAACTCGTCCCTGACAGGGACACTCCTACACAAAGATTGTTGCGGGTCTGA
AATGGCCTGTGAGACCCCCAATGCTGGAACAAGAGAGGACCCCACTGACACCCCAGCCACAGATAGTAGC
AGGGCTGTTCATGGCCACAGTGGCCTCAAAAGGCAACGAATTGAATTGGAAGATACAGATTCAGAGAATT
CCTCCTCAGAGAAGAAATTAAAAACATGA

Translation (942 aa):
MKRRAGLGGSMRSVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLV
SGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNTKVFSGGNDEQVILHDVESSETLDVFA
HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKE
GVGLWDIRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSC
TMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICS
SGVEKIIKIWSPYKQPGCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFFD
SLVRREIEGWSSDSDSDLSESTILQLHAGVSERSGYTDSESSASLPRSPPPTVDESADNAFHLGPLRVTT
TNTVASTPPTPTCEDAASRQQRLSALRRYQDKRLLALSNESDSEENVCEVELDTDLFPRPRSPSPEDESS
SSSSSSSSEDEEELNERRASTWQRNAMRRRQKTTREDKPSAPIKPTNTYIGEDNYDYPQIKVDDLSSSPT
SSPERSTSTLEIQPSRASPTSDIESVERKIYKAYKWLRYSYISYSNNKDGETSLVTGEADEGRAGTSHKD
NPAPSSSKEACLNIAMAQRNQDLPPEGCSKDTFKEETPRTPSNGPGHEHSSHAWAEVPEGTSQDTGNSGS
VEHPFETKKLNGKALSSRAEEPPSPPVPKASGSTLNSGSGNCPRTQSDDSEERSLETICANHNNGRLHPR
PPHPHNNGQNLGELEVVAYSSPGHSDTDRDNSSLTGTLLHKDCCGSEMACETPNAGTREDPTDTPATDSS
RAVHGHSGLKRQRIELEDTDSENSSSEKKLKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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