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Report for CCDS32237.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32237.1 Public Homo sapiens 15 FAM227B 24 110 108 CCDS HistoryNCBI Gene:196951Re-query CCDS DB by CCDS ID:32237.1Re-query CCDS DB by GeneID:196951See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32237.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299338.11 ENSP00000299338.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299338.11Link to Ensembl Protein Viewer:ENSP00000299338.6Re-query CCDS DB by Nucleotide ID:ENST00000299338Re-query CCDS DB by Protein ID:ENSP00000299338
Original member Current member NCBI NM_152647.3 NP_689860.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152647.3Link to Protein Sequence:NP_689860.2Re-query CCDS DB by Nucleotide ID:NM_152647Re-query CCDS DB by Protein ID:NP_689860Link to BLAST:NP_689860.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689860.2 508 Q96M60-1 508 100% 0 0

Chromosomal Locations for CCDS 32237.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 49328568 49328675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49331780 49331849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49335419 49335496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49367448 49367608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49371302 49371399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49508211 49508348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49541680 49541806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49568245 49568346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49575011 49575109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49576741 49576845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49577629 49577664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49588016 49588083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49589776 49590007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49611215 49611268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49615121 49615171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGGCAGGCCAACGAACATGTCAAAGGAGGAGCAGCAGAGCTGGCCCCGGGAAAATGCAAGAACCTCCAA
AGAGCATTGAAGAATTCTTAAAGTTTCAAAATTGGGATTATTGGCCAAGGGAAATCCATTTTAGAGATGA
TGATAAATGGTCATGCACTCTGAAAAAAATAAAAGAAGATAGTTCATTTGTTTCAATTTATACACACCTA
TGGGAAAATGTTCCTCGAATATTTGAAGCACTTTTGATCATGGAATCAAAATTAAAGGAATATTCACTTA
TTTTGCAAAACCACACCTCTGAAATATTTAAGTGGAAAAGCATGATTTCTGAGACAAGTTCTTATAGAAA
ATTGGAACGATATGGGGAATTTCTAAAGAAGTACCATAAGAAAAAAAAGATAATGCTTTCAGATGAAATG
GAGACAGAGAAGAATATAGAGGGTTGCAGCTTCACAGGATTCAAAGCAAATGAACTTACTCAGCTACCCA
GACATTTGGATGCTGAACAAATTTATCTTTTTATTTTAAAAGCCCATAATTTTGATGAAAGAGTTTTTAA
AATCTGGAAGACTCATTTTCTCTCAGAAGCCTCCATTGCTCTTTTGCATGACTCCTTTTGGTGGTGGTTT
CTCCATAAATTTAGGCCTGACAGAGAAAACCAAGATTGCTTATTCGATAGAATTTCAGAAAGTTATGTGA
CACTTTTCATGAGCATACCTCTAAGTCGAAAGGATGCATTTTTTCAGATATATCCTGATTGTTTGGCACA
AGCCATATATGCAACGTTCCATGAAGCATTTCCAGAATCGAGTTACCTCTTTAATGATGAATTTAAAGAA
GATCTAGGGAATAACATTTTTCTTTGGTGTTCAGGTTTAAAACCTCAAAAAGGCTTTTGGATCCACTGGA
AACTGAAAGAACTCTCCACAACCACCATTCATGGTAGCAAAAAAGCACCTGCAAAATCAGTAAAGGAAAG
AATTGCAGACAGTCAAGAACATATATCAACTAGTATCGACTTCAATATTATAAAGATTCTGAACAACCCA
AGAGCATATACGTTGCCCATATCCAAGGAAGAATCAAGATTATCAAGACTAGCAACAAAGTCGCACTATA
GTAGTACTGGTCCAGAGTTTAATCGTGTTCTCTTCAATTTTGGAGGTCAGAGTCCATTGATTTTATATTA
TCTTAAGATGCATGAGCTGGCTGGTATTTCCAAAGCACCTAAGAAAACCAAGATTAAACTCACTAAGATA
TTCCAGGAACCACTACCTGCTCCAACATACCGTGATGTTATAAAGGAGGCAAAAAGACAATTTGCAAGGA
ACCAAAAGGATTTTAGGATACTCCAAGCAAAGGCTACCAAGAAACCTCATGAAGTGAAACAGGACTTTGA
GAAGTTCCTACATAAACTGCGTTCCGAAGCTGAAATTGAGAGAGAATGTGTGGCATCACTATCGTCATCA
TCATCATCATCACCATCATCAACAGACAACTACAACTTTGAGGAAGAAGAATACTAA

Translation (508 aa):
MAGQRTCQRRSSRAGPGKMQEPPKSIEEFLKFQNWDYWPREIHFRDDDKWSCTLKKIKEDSSFVSIYTHL
WENVPRIFEALLIMESKLKEYSLILQNHTSEIFKWKSMISETSSYRKLERYGEFLKKYHKKKKIMLSDEM
ETEKNIEGCSFTGFKANELTQLPRHLDAEQIYLFILKAHNFDERVFKIWKTHFLSEASIALLHDSFWWWF
LHKFRPDRENQDCLFDRISESYVTLFMSIPLSRKDAFFQIYPDCLAQAIYATFHEAFPESSYLFNDEFKE
DLGNNIFLWCSGLKPQKGFWIHWKLKELSTTTIHGSKKAPAKSVKERIADSQEHISTSIDFNIIKILNNP
RAYTLPISKEESRLSRLATKSHYSSTGPEFNRVLFNFGGQSPLILYYLKMHELAGISKAPKKTKIKLTKI
FQEPLPAPTYRDVIKEAKRQFARNQKDFRILQAKATKKPHEVKQDFEKFLHKLRSEAEIERECVASLSSS
SSSSPSSTDNYNFEEEEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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