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Report for CCDS32277.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32277.1 Public Homo sapiens 15 GLCE 24 110 108 CCDS HistoryNCBI Gene:26035Re-query CCDS DB by CCDS ID:32277.1Re-query CCDS DB by GeneID:26035See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32277.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261858.7 ENSP00000261858.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261858.7Link to Ensembl Protein Viewer:ENSP00000261858.2Re-query CCDS DB by Nucleotide ID:ENST00000261858Re-query CCDS DB by Protein ID:ENSP00000261858
Original member Current member NCBI NM_001324093.2 NP_001311022.1 Accepted alive Link to Nucleotide Sequence:NM_001324093.2Link to Protein Sequence:NP_001311022.1Re-query CCDS DB by Nucleotide ID:NM_001324093Re-query CCDS DB by Protein ID:NP_001311022Link to BLAST:NP_001311022.1
Original member Current member NCBI NM_001324094.2 NP_001311023.1 Accepted alive Link to Nucleotide Sequence:NM_001324094.2Link to Protein Sequence:NP_001311023.1Re-query CCDS DB by Nucleotide ID:NM_001324094Re-query CCDS DB by Protein ID:NP_001311023Link to BLAST:NP_001311023.1
Original member Current member NCBI NM_015554.3 NP_056369.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015554.3Link to Protein Sequence:NP_056369.1Re-query CCDS DB by Nucleotide ID:NM_015554Re-query CCDS DB by Protein ID:NP_056369Link to BLAST:NP_056369.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001311022.1 617 O94923 617 100% 0 0
NP_001311023.1 617 O94923 617 100% 0 0
NP_056369.1 617 O94923 617 100% 0 0

Chromosomal Locations for CCDS 32277.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 69255807 69256392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69261087 69261329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69268220 69269244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1854 nt):
ATGCGTTGCTTGGCAGCTCGGGTCAACTATAAGACTTTGATTATTATCTGCGCACTCTTCACTTTGGTCA
CAGTACTTTTGTGGAATAAGTGTTCCAGTGACAAAGCAATCCAGTTTCCACGGCGTTCGAGTAGTGGCTT
CAGAGTGGATGGGTTTGAAAAAAGAGCAGCAGCATCTGAGAGTAACAACTATATGAACCACGTGGCCAAA
CAACAGTCTGAGGAAGCATTCCCTCAGGAACAGCAGAAAGCACCCCCTGTTGTTGGGGGCTTCAATAGCA
ATGTGGGAAGTAAGGTGTTAGGGCTCAAATATGAAGAAATTGACTGTCTCATAAATGATGAACACACAAT
TAAAGGGAGACGAGAGGGGAACGAAGTCTTTCTTCCATTCACTTGGGTTGAGAAATATTTTGATGTTTAT
GGAAAGGTGGTTCAGTATGATGGCTATGATCGGTTTGAATTCTCTCATAGCTATTCCAAAGTCTATGCAC
AGAGAGCCCCCTATCACCCCGATGGTGTGTTTATGTCTTTTGAAGGCTACAATGTGGAAGTCCGAGACAG
AGTCAAGTGCATAAGTGGGGTTGAAGGTGTGCCATTATCTACACAATGGGGACCTCAAGGCTATTTCTAT
CCAATCCAGATTGCACAGTATGGATTAAGTCATTACAGCAAGAATCTAACTGAGAAACCTCCTCACATAG
AGGTATATGAAACAGCAGAAGACAGAGACAAAAACAAGCCTAATGACTGGACTGTGCCAAAGGGCTGCTT
TATGGCGAATGTGGCTGATAAGTCTAGATTCACCAATGTCAAACAGTTTATTGCACCAGAAACCAGTGAA
GGTGTATCCTTGCAACTGGGAAACACAAAAGATTTTATTATTTCATTTGACCTCAAGTTCTTGACAAATG
GAAGTGTGTCCGTGGTTCTAGAGACCACAGAAAAGAATCAGCTCTTCACTATACATTATGTCTCAAATGC
TCAGCTAATTGCTTTTAAAGAAAGAGATATATACTATGGCATTGGGCCCAGAACTTCATGGAGCACAGTT
ACCAGGGACCTGGTCACTGACCTCAGGAAAGGAGTGGGTCTTTCAAACACAAAAGCTGTCAAGCCAACCA
AAATAATGCCCAAGAAGGTGGTTAGGTTGATTGCAAAAGGTAAGGGATTCCTCGACAACATTACCATCTC
TACCACAGCCCACATGGCTGCATTTTTTGCTGCTAGTGATTGGCTAGTAAGGAACCAGGATGAGAAAGGT
GGCTGGCCAATTATGGTGACCCGTAAGTTAGGGGAAGGGTTCAAGTCTTTAGAGCCAGGATGGTATTCTG
CCATGGCCCAAGGGCAAGCCATTTCTACATTAGTCAGGGCCTATCTGTTAACAAAAGACCATATATTCCT
CAATTCAGCTTTAAGGGCAACAGCCCCTTATAAGTTTCTATCTGAGCAGCATGGAGTTAAAGCTGTGTTT
ATGAATAAACATGACTGGTATGAAGAATATCCAACCACACCTAGCTCTTTTGTTTTAAATGGCTTTATGT
ATTCTTTAATTGGGCTGTATGACTTAAAAGAAACTGCAGGGGAAAAACTCGGAAAAGAAGCAAGGTCCTT
GTATGAGCGTGGCATGGAATCTCTTAAAGCCATGCTGCCCTTGTATGACACTGGCTCAGGAACCATCTAT
GACCTCCGTCACTTCATGCTTGGCATCGCTCCTAACCTGGCTCGCTGGGACTATCATACCACCCACATCA
ATCAGTTGCAGCTACTCAGTACCATTGATGAGTCCCCAGTCTTCAAAGAATTTGTCAAGAGGTGGAAAAG
CTACCTTAAAGGCAGCAGGGCAAAGCACAACTAG

Translation (617 aa):
MRCLAARVNYKTLIIICALFTLVTVLLWNKCSSDKAIQFPRRSSSGFRVDGFEKRAAASESNNYMNHVAK
QQSEEAFPQEQQKAPPVVGGFNSNVGSKVLGLKYEEIDCLINDEHTIKGRREGNEVFLPFTWVEKYFDVY
GKVVQYDGYDRFEFSHSYSKVYAQRAPYHPDGVFMSFEGYNVEVRDRVKCISGVEGVPLSTQWGPQGYFY
PIQIAQYGLSHYSKNLTEKPPHIEVYETAEDRDKNKPNDWTVPKGCFMANVADKSRFTNVKQFIAPETSE
GVSLQLGNTKDFIISFDLKFLTNGSVSVVLETTEKNQLFTIHYVSNAQLIAFKERDIYYGIGPRTSWSTV
TRDLVTDLRKGVGLSNTKAVKPTKIMPKKVVRLIAKGKGFLDNITISTTAHMAAFFAASDWLVRNQDEKG
GWPIMVTRKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLTKDHIFLNSALRATAPYKFLSEQHGVKAVF
MNKHDWYEEYPTTPSSFVLNGFMYSLIGLYDLKETAGEKLGKEARSLYERGMESLKAMLPLYDTGSGTIY
DLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPVFKEFVKRWKSYLKGSRAKHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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