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Report for CCDS32378.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32378.1 Public Homo sapiens 16 IL32 24 110 108 CCDS HistoryNCBI Gene:9235Re-query CCDS DB by CCDS ID:32378.1Re-query CCDS DB by GeneID:9235See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32378.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396887.7 ENSP00000380096.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396887.7Link to Ensembl Protein Viewer:ENSP00000380096.3Re-query CCDS DB by Nucleotide ID:ENST00000396887Re-query CCDS DB by Protein ID:ENSP00000380096
Original member Current member EBI ENST00000551122.5 ENSP00000447496.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000551122.5Link to Ensembl Protein Viewer:ENSP00000447496.1Re-query CCDS DB by Nucleotide ID:ENST00000551122Re-query CCDS DB by Protein ID:ENSP00000447496
Original member Current member EBI ENST00000549213.5 ENSP00000447812.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000549213.5Link to Ensembl Protein Viewer:ENSP00000447812.1Re-query CCDS DB by Nucleotide ID:ENST00000549213Re-query CCDS DB by Protein ID:ENSP00000447812
Original member Current member NCBI NM_001012633.4 NP_001012651.1 Accepted alive Link to Nucleotide Sequence:NM_001012633.4Link to Protein Sequence:NP_001012651.1Re-query CCDS DB by Nucleotide ID:NM_001012633Re-query CCDS DB by Protein ID:NP_001012651Link to BLAST:NP_001012651.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012651.1 131 P24001-4 131 100% 0 0

Chromosomal Locations for CCDS 32378.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3065812 3065826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3067377 3067415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3067554 3067613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3067984 3068010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3068180 3068239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3068990 3069109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3069281 3069355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGTGCTTCCCGAAGGTCCTCTCTGATGACATGAAGAAGCTGAAGGCCCGAATGCACCAGGCCATAGAAA
GATTTTATGATAAAATGCAAAATGCAGAATCAGGACGTGGACAGGTGATGTCGAGCCTGGCAGAGCTGGA
GGACGACTTCAAAGAGGGCTACCTGGAGACAGTGGCGGCTTATTATGAGGAGCAGCACCCAGAGCTCACT
CCTCTACTTGAAAAAGAAAGAGATGGATTACGGTGCCGAGGCAACAGATCCCCTGTCCCGGATGTTGAGG
ATCCCGCAACCGAGGAGCCTGGGGAGAGCTTTTGTGACAAGTCCTACGGAGCCCCACGGGGGGACAAGGA
GGAGCTGACACCCCAGAAGTGCTCTGAACCCCAATCCTCAAAATGA

Translation (131 aa):
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELT
PLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKSYGAPRGDKEELTPQKCSEPQSSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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