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Report for CCDS32713.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32713.1 Public Homo sapiens 17 KPNA2 24 110 108 CCDS HistoryNCBI Gene:3838Re-query CCDS DB by CCDS ID:32713.1Re-query CCDS DB by GeneID:3838See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32713.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330459.8 ENSP00000332455.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330459.8Link to Ensembl Protein Viewer:ENSP00000332455.3Re-query CCDS DB by Nucleotide ID:ENST00000330459Re-query CCDS DB by Protein ID:ENSP00000332455
Original member Current member EBI ENST00000537025.6 ENSP00000438483.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537025.6Link to Ensembl Protein Viewer:ENSP00000438483.2Re-query CCDS DB by Nucleotide ID:ENST00000537025Re-query CCDS DB by Protein ID:ENSP00000438483
Original member Current member EBI ENST00000579754.2 ENSP00000462331.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000579754.2Link to Ensembl Protein Viewer:ENSP00000462331.2Re-query CCDS DB by Nucleotide ID:ENST00000579754Re-query CCDS DB by Protein ID:ENSP00000462331
Original member Current member EBI ENST00000584026.6 ENSP00000463602.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000584026.6Link to Ensembl Protein Viewer:ENSP00000463602.2Re-query CCDS DB by Nucleotide ID:ENST00000584026Re-query CCDS DB by Protein ID:ENSP00000463602
Original member Current member EBI ENST00000677086.1 ENSP00000504655.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677086.1Link to Ensembl Protein Viewer:ENSP00000504655.1Re-query CCDS DB by Nucleotide ID:ENST00000677086Re-query CCDS DB by Protein ID:ENSP00000504655
Original member Current member EBI ENST00000679078.1 ENSP00000504685.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679078.1Link to Ensembl Protein Viewer:ENSP00000504685.1Re-query CCDS DB by Nucleotide ID:ENST00000679078Re-query CCDS DB by Protein ID:ENSP00000504685
Original member NCBI NM_001320611.2 NP_001307540.1 Updated not alive Link to Nucleotide Sequence:NM_001320611.2Link to Protein Sequence:NP_001307540.1Re-query CCDS DB by Nucleotide ID:NM_001320611Re-query CCDS DB by Protein ID:NP_001307540
Current member NCBI NM_001320611.3 NP_001307540.1 Accepted alive Link to Nucleotide Sequence:NM_001320611.3Link to Protein Sequence:NP_001307540.1Re-query CCDS DB by Nucleotide ID:NM_001320611Re-query CCDS DB by Protein ID:NP_001307540Link to BLAST:NP_001307540.1
Original member Current member NCBI NM_002266.4 NP_002257.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002266.4Link to Protein Sequence:NP_002257.1Re-query CCDS DB by Nucleotide ID:NM_002266Re-query CCDS DB by Protein ID:NP_002257Link to BLAST:NP_002257.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307540.1 529 P52292 529 100% 0 0
NP_002257.1 529 P52292 529 100% 0 0

Chromosomal Locations for CCDS 32713.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 68037133 68037207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68037358 68037495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68040678 68040766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68042085 68042353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68042905 68042999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68043100 68043363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68043838 68044071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68044321 68044503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68045772 68045921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68046504 68046596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGTCCACCAACGAGAATGCTAATACACCAGCTGCCCGTCTTCACAGATTCAAGAACAAGGGAAAAGACA
GTACAGAAATGAGGCGTCGCAGAATAGAGGTCAATGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGAT
GCTGAAGAGGAGAAATGTAAGCTCATTTCCTGATGATGCTACTTCTCCGCTGCAGGAAAACCGCAACAAC
CAGGGCACTGTAAATTGGTCTGTTGATGACATTGTCAAAGGCATAAATAGCAGCAATGTGGAAAATCAGC
TCCAAGCTACTCAAGCTGCCAGGAAACTACTTTCCAGAGAAAAACAGCCCCCCATAGACAACATAATCCG
GGCTGGTTTGATTCCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTGTAGTCCCATTCAGTTTGAATCT
GCTTGGGCACTCACTAACATTGCTTCTGGGACATCAGAACAAACCAAGGCTGTGGTAGATGGAGGTGCCA
TCCCAGCATTCATTTCTCTGTTGGCATCTCCCCATGCTCACATCAGTGAACAAGCTGTCTGGGCTCTAGG
AAACATTGCAGGTGATGGCTCAGTGTTCCGAGACTTGGTTATTAAGTACGGTGCAGTTGACCCACTGTTG
GCTCTCCTTGCAGTTCCTGATATGTCATCTTTAGCATGTGGCTACTTACGTAATCTTACCTGGACACTTT
CTAATCTTTGCCGCAACAAGAATCCTGCACCCCCGATAGATGCTGTTGAGCAGATTCTTCCTACCTTAGT
TCGGCTCCTGCATCATGATGATCCAGAAGTATTAGCAGATACCTGCTGGGCTATTTCCTACCTTACTGAT
GGTCCAAATGAACGAATTGGCATGGTGGTGAAAACAGGAGTTGTGCCCCAACTTGTGAAGCTTCTAGGAG
CTTCTGAATTGCCAATTGTGACTCCTGCCCTAAGAGCCATAGGGAATATTGTCACTGGTACAGATGAACA
GACTCAGGTTGTGATTGATGCAGGAGCACTCGCCGTCTTTCCCAGCCTGCTCACCAACCCCAAAACTAAC
ATTCAGAAGGAAGCTACGTGGACAATGTCAAACATCACAGCCGGCCGCCAGGACCAGATACAGCAAGTTG
TGAATCATGGATTAGTCCCATTCCTTGTCAGTGTTCTCTCTAAGGCAGATTTTAAGACACAAAAGGAAGC
TGTGTGGGCCGTGACCAACTATACCAGTGGTGGAACAGTTGAACAGATTGTGTACCTTGTTCACTGTGGC
ATAATAGAACCGTTGATGAACCTCTTAACTGCAAAAGATACCAAGATTATTCTGGTTATCCTGGATGCCA
TTTCAAATATCTTTCAGGCTGCTGAGAAACTAGGTGAAACTGAGAAACTTAGTATAATGATTGAAGAATG
TGGAGGCTTAGACAAAATTGAAGCTCTACAAAACCATGAAAATGAGTCTGTGTATAAGGCTTCGTTAAGC
TTAATTGAGAAGTATTTCTCTGTAGAGGAAGAGGAAGATCAAAACGTTGTACCAGAAACTACCTCTGAAG
GCTACACTTTCCAAGTTCAGGATGGGGCTCCTGGGACCTTTAACTTTTAG

Translation (529 aa):
MSTNENANTPAARLHRFKNKGKDSTEMRRRRIEVNVELRKAKKDDQMLKRRNVSSFPDDATSPLQENRNN
QGTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFES
AWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLL
ALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD
GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTN
IQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCG
IIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLS
LIEKYFSVEEEEDQNVVPETTSEGYTFQVQDGAPGTFNF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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