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Report for CCDS32818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32818.1 Public Homo sapiens 18 CELF4 24 110 108 CCDS HistoryNCBI Gene:56853Re-query CCDS DB by CCDS ID:32818.1Re-query CCDS DB by GeneID:56853See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32818.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420428.7 ENSP00000410584.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000420428.7Link to Ensembl Protein Viewer:ENSP00000410584.2Re-query CCDS DB by Nucleotide ID:ENST00000420428Re-query CCDS DB by Protein ID:ENSP00000410584
Original member Current member EBI ENST00000591282.5 ENSP00000464794.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591282.5Link to Ensembl Protein Viewer:ENSP00000464794.1Re-query CCDS DB by Nucleotide ID:ENST00000591282Re-query CCDS DB by Protein ID:ENSP00000464794
Original member Current member NCBI NM_020180.4 NP_064565.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020180.4Link to Protein Sequence:NP_064565.1Re-query CCDS DB by Nucleotide ID:NM_020180Re-query CCDS DB by Protein ID:NP_064565Link to BLAST:NP_064565.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064565.1 486 Q9BZC1-1 486 100% 0 0

Chromosomal Locations for CCDS 32818.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 37253811 37253938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37259181 37259264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37264674 37264757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37266533 37266598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37270768 37270917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37273016 37273163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37274311 37274454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37274805 37274884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37275115 37275243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37321803 37321881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37485525 37485607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37565356 37565641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGTACCAACGGGCTCG
GCAGCAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTCC
CATGAAGGACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGGACCTC
AAGCCCCTCTTCGAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATGC
ACAAAGGCTGCGCCTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGA
GCAGAAGACTCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGT
AGTAGCTGCCTGCGCCAGCCCCCTTCACAAGATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGT
CCGAGGACGACGTGCGCCGCCTTTTCGAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCC
CGACGGCAACAGCAAGGGGTGCGCCTTTGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAAC
GCGCTACACGGCAGCCAGACCATGCCGGGAGCCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACA
AGGAGCGCACGATGCGGCGAATGCAGCAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCC
TTTCGGGGCCTACGGCGCCTACGCTCAGGCACTGATGCAGCAGCAAGCGGCCCTGATGGCATCAGTCGCG
CAGGGCGGCTACCTGAACCCCATGGCTGCCTTCGCTGCCGCCCAGATGCAGCAGATGGCGGCCCTCAACA
TGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCAGGTGGCAGCACCCCTCCGGGCATCACTGCACC
AGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTTCACCGGCCTCCCCCCACAGGCCAATGGG
CAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACCCAGCACAGAGCCCCACCGCCGCGG
ACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAGGTCCAGCTGCCTACCCTGCTGCCTATGG
TCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAGAGAAGGGCCCGAGGGC
TGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTT
TCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGAT
CGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGA

Translation (486 aa):
MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDL
KPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGG
SSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN
ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVA
QGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANG
QPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEG
CNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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