NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS33014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33014.1 Public Homo sapiens 19 ECH1 24 110 108 CCDS HistoryNCBI Gene:1891Re-query CCDS DB by CCDS ID:33014.1Re-query CCDS DB by GeneID:1891See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33014.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221418.9 ENSP00000221418.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221418.9Link to Ensembl Protein Viewer:ENSP00000221418.3Re-query CCDS DB by Nucleotide ID:ENST00000221418Re-query CCDS DB by Protein ID:ENSP00000221418
Original member Current member NCBI NM_001398.3 NP_001389.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001398.3Link to Protein Sequence:NP_001389.2Re-query CCDS DB by Nucleotide ID:NM_001398Re-query CCDS DB by Protein ID:NP_001389Link to BLAST:NP_001389.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001389.2 328 Q13011 328 100% 0 0

Chromosomal Locations for CCDS 33014.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38815613 38815717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38815857 38816007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38816284 38816355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38816453 38816523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38817065 38817129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38817316 38817364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38817451 38817575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38831078 38831166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38831309 38831516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38831721 38831772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGCGGCGGGGATAGTGGCTTCTCGCAGACTCCGCGACCTACTGACCCGGCGACTGACAGGCTCCAACT
ACCCGGGACTCAGTATTAGCCTTCGCCTCACTGGCTCCTCTGCACAAGAGGAGGCTTCCGGAGTAGCCCT
CGGTGAAGCCCCAGACCACAGCTATGAGTCCCTTCGTGTGACGTCTGCGCAGAAACATGTTCTGCATGTC
CAGCTCAACCGGCCCAACAAGAGGAATGCCATGAACAAGGTCTTCTGGAGAGAGATGGTAGAGTGCTTCA
ACAAGATTTCGAGAGACGCTGACTGTCGGGCGGTGGTGATCTCTGGTGCAGGAAAAATGTTCACTGCAGG
TATTGACCTGATGGACATGGCTTCGGACATCCTGCAGCCCAAAGGAGATGATGTGGCCCGGATCAGCTGG
TACCTCCGTGACATCATCACTCGATACCAGGAGACCTTCAACGTCATCGAGAGGTGCCCCAAGCCCGTGA
TTGCTGCCGTCCATGGGGGCTGCATTGGCGGAGGTGTGGACCTTGTCACCGCCTGTGACATCCGGTACTG
TGCCCAGGATGCTTTCTTCCAGGTGAAGGAGGTGGACGTGGGTTTGGCTGCCGATGTAGGAACACTGCAG
CGCCTGCCCAAGGTCATCGGGAACCAGAGCCTGGTCAACGAGCTGGCCTTCACCGCCCGCAAGATGATGG
CTGACGAGGCCCTGGGCAGTGGGCTGGTCAGCCGGGTGTTCCCAGACAAAGAGGTCATGCTGGATGCTGC
CTTAGCGCTGGCGGCCGAGATTTCCAGCAAGAGCCCCGTGGCGGTGCAGAGCACCAAGGTCAACCTGCTG
TATTCCCGCGACCATTCGGTGGCCGAGAGCCTCAACTACGTGGCGTCCTGGAACATGAGCATGCTGCAGA
CCCAAGACCTCGTGAAGTCGGTCCAGGCCACGACTGAGAACAAGGAACTGAAAACCGTCACCTTCTCCAA
GCTCTGA

Translation (328 aa):
MAAGIVASRRLRDLLTRRLTGSNYPGLSISLRLTGSSAQEEASGVALGEAPDHSYESLRVTSAQKHVLHV
QLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISW
YLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQ
RLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLL
YSRDHSVAESLNYVASWNMSMLQTQDLVKSVQATTENKELKTVTFSKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH