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Report for CCDS33141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33141.1 Public Homo sapiens 2 TMEM18 24 110 108 CCDS HistoryNCBI Gene:129787Re-query CCDS DB by CCDS ID:33141.1Re-query CCDS DB by GeneID:129787See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33141.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281017.8 ENSP00000281017.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281017.8Link to Ensembl Protein Viewer:ENSP00000281017.3Re-query CCDS DB by Nucleotide ID:ENST00000281017Re-query CCDS DB by Protein ID:ENSP00000281017
Original member Current member NCBI NM_152834.4 NP_690047.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152834.4Link to Protein Sequence:NP_690047.2Re-query CCDS DB by Nucleotide ID:NM_152834Re-query CCDS DB by Protein ID:NP_690047Link to BLAST:NP_690047.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_690047.2 140 Q96B42-1 140 100% 0 0

Chromosomal Locations for CCDS 33141.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 669580 669675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 669757 669850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 672808 672862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 675510 675630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 677289 677345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGCCGTCCGCCTTCTCTGTCAGCTCTTTCCCCGTCAGCATCCCAGCCGTGCTCACGCAGACGGACTGGA
CTGAGCCCTGGCTCATGGGGCTGGCCACCTTCCACGCGCTCTGCGTGCTCCTCACCTGCTTGTCCTCCCG
AAGCTACAGACTACAGATCGGGCACTTTCTGTGTCTAGTCATCTTAGTCTACTGTGCTGAATACATCAAT
GAGGCGGCTGCGATGAACTGGAGATTATTTTCGAAATACCAGTATTTCGACTCCAGGGGGATGTTCATTT
CTATAGTATTTTCAGCCCCACTGCTGGTGAATGCCATGATCATTGTGGTTATGTGGGTATGGAAGACTTT
GAATGTGATGACTGACCTGAAGAATGCACAAGAGAGAAGAAAGGAAAAGAAAAGGAGAAGGAAAGAAGAC
TGA

Translation (140 aa):
MPSAFSVSSFPVSIPAVLTQTDWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYIN
EAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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