NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS33333.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33333.1 Public Homo sapiens 2 EVX2 24 110 108 CCDS HistoryNCBI Gene:344191Re-query CCDS DB by CCDS ID:33333.1Re-query CCDS DB by GeneID:344191See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33333.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308618.5 ENSP00000312385.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308618.5Link to Ensembl Protein Viewer:ENSP00000312385.4Re-query CCDS DB by Nucleotide ID:ENST00000308618Re-query CCDS DB by Protein ID:ENSP00000312385
Original member Current member NCBI NM_001080458.2 NP_001073927.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080458.2Link to Protein Sequence:NP_001073927.1Re-query CCDS DB by Nucleotide ID:NM_001080458Re-query CCDS DB by Protein ID:NP_001073927Link to BLAST:NP_001073927.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073927.1 476 Q03828 476 100% 0 0

Chromosomal Locations for CCDS 33333.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 176080107 176080838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 176082178 176082449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 176083350 176083776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1431 nt):
ATGATGGAAAGAATAAGAAAAGAGATGATTCTGATGGAGAGAGGGCTGCACAGCCCTACGGCGGGCAAGA
GATTCTCCAATTTGTCCAACTCGGCTGGCAATGCTGTGCTCGAGGCCCTGGAAAATTCGCAGCACCCGGC
TCGCCTAAGCCCGCGCCTGCCGTCTGCCCCCCTGCACAGCGCTCTGGGAGAACTCCCCGCCAAGGGCAAA
TTCGAAATAGACACTTTGTTCAACCTGCAGCACACGGGCAGCGAAAGCACCGTCTCCTCCGAAATCTCCT
CCGCCGCCGAGAGCCGCAAGAAGCCGGGCCATTATTCAGAGGCGGCCGCTGAGGCCGACATGAGCAGCGA
CGTGGAGGTGGGCTGCTCCGCGCTTCGCTCCCCCGGGGGCCTCGGCGCCGCTCAGCTTAAGGAAAACAAT
GGCAAAGGGTACGCAGAGAGCGGCTCGGCTGCCGGCACCACGACGTCGGCGTCGGGCTCAGGCCTCGGAA
GCCTGCATGGAGGCAGCGGAGGCAGCGGCGGGAGCGCGGCGCTGGGTGGCTCCGGCTCTGGCGCGGATCA
AGTGCGGCGCTACCGTACGGCGTTCACCCGCGAGCAGATCGCGCGCCTGGAGAAGGAGTTCTACCGGGAG
AACTATGTGTCGCGGCCCCGCCGGTGCGAGCTGGCCGCGGCACTCAACCTGCCCGAAACCACCATCAAGG
TGTGGTTCCAGAACCGGCGCATGAAGGACAAGCGGCAGCGCCTGGCCATGTCCTGGCCGCACCCAGCCGA
CCCCAGCTTCTACACCTACATGATGACGCACGCGGCCGCCACCGGAAGCCTGCCCTACCCCTTCCACTCG
CACGTGCCGCTGCACTACTACCCGCACGTGGGCGTCACGGCGGCGGCGGCCGCGGCTGCAGCCTCAGGCG
CGGCGGCCGCGGCTTCGTCGCCCTTCGCTACTTCCATCCGGCCACTGGACACCTTCCGCGCCCTCTCGCA
CCCCTACTCTCGGCCGGAGCTGCTGTGTAGCTTCCGCCACCCTGGTCTCTACCAGGCTCCCGCGGCCGCC
GCGGGGCTCAACAGCGCGGCCTCTGCCGCGGCAGCCGCGGCAGCCGCAGCGGCTGCGGCCTCCTCGGCGG
CGGCGGCCGGCGCGCCCCCCAGCGGCGGCTCTGCACCCTGCTCGTGCCTCAGTTGCCACAGCAGTCAGTC
GGCGGCGGCAGCCGCGGCAGCAGCTGCCGCAGCCCTGGGTTCCCGGGGTGGCGGTGGCGGCGGCGGTGGT
GGTGGTGGCGGCGGCGGCGGGGGCGCCGGGGCCGGGGGAGGCTCGGACTTCGGCTGCAGCGCGGCGGCGC
CGCGTTCCGAGAGCGGCTTCCTGCCCTACTCGGCCGCGGTGCTTAGTAAGACGGCCGTGAGCCCGCCGGA
CCAGAGGGACGAGGCTCCGCTCACCAGATAA

Translation (476 aa):
MMERIRKEMILMERGLHSPTAGKRFSNLSNSAGNAVLEALENSQHPARLSPRLPSAPLHSALGELPAKGK
FEIDTLFNLQHTGSESTVSSEISSAAESRKKPGHYSEAAAEADMSSDVEVGCSALRSPGGLGAAQLKENN
GKGYAESGSAAGTTTSASGSGLGSLHGGSGGSGGSAALGGSGSGADQVRRYRTAFTREQIARLEKEFYRE
NYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYPFHS
HVPLHYYPHVGVTAAAAAAAASGAAAAASSPFATSIRPLDTFRALSHPYSRPELLCSFRHPGLYQAPAAA
AGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSRGGGGGGGG
GGGGGGGGAGAGGGSDFGCSAAAPRSESGFLPYSAAVLSKTAVSPPDQRDEAPLTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH