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Report for CCDS3342.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3342.1 Public Homo sapiens 4 DGKQ 24 110 108 CCDS HistoryNCBI Gene:1609Re-query CCDS DB by CCDS ID:3342.1Re-query CCDS DB by GeneID:1609See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3342.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273814.8 ENSP00000273814.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273814.8Link to Ensembl Protein Viewer:ENSP00000273814.3Re-query CCDS DB by Nucleotide ID:ENST00000273814Re-query CCDS DB by Protein ID:ENSP00000273814
Original member Current member NCBI NM_001347.4 NP_001338.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001347.4Link to Protein Sequence:NP_001338.2Re-query CCDS DB by Nucleotide ID:NM_001347Re-query CCDS DB by Protein ID:NP_001338Link to BLAST:NP_001338.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338.2 942 P52824 942 100% 0 0

Chromosomal Locations for CCDS 3342.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 960620 960721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 961049 961201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 961467 961578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 961688 961834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 961982 962082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 962435 962613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 962772 962920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 963139 963290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 965176 965291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 965491 965529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 965928 966078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 966466 966527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 966748 966802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 966964 967054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 967129 967361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 967549 967649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 967728 967802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 967880 968027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 968282 968407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 968479 968564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 968811 968910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 970993 971072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 973212 973482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2829 nt):
ATGGCGGCGGCGGCCGAGCCCGGGGCCCGCGCCTGGCTGGGCGGCGGCTCCCCGCGCCCCGGCAGCCCGG
CCTGCAGCCCCGTGCTGGGCTCAGGAGGCCGCGCGCGCCCGGGGCCGGGGCCGGGGCCGGGACCCGAGCG
GGCGGGCGTCAGAGCCCCGGGCCCCGCTGCCGCGCCGGGACACAGCTTCCGGAAGGTGACGCTCACCAAG
CCCACCTTCTGCCACCTCTGCTCCGACTTCATCTGGGGGCTGGCCGGCTTCCTGTGCGACGTCTGCAATT
TCATGTCTCATGAGAAGTGCCTGAAGCACGTGAGGATCCCGTGCACGAGTGTGGCACCCAGCCTGGTCCG
GGTTCCTGTAGCCCACTGCTTCGGCCCCCGGGGGCTCCACAAGCGCAAGTTCTGTGCTGTCTGCCGCAAG
GTCCTGGAGGCACCGGCGCTCCACTGCGAAGTGTGTGAGCTGCACCTCCACCCAGACTGTGTGCCCTTCG
CCTGCAGTGACTGCCGCCAGTGCCACCAGGATGGGCACCAGGATCACGACACCCATCACCACCACTGGCG
GGAGGGGAACCTGCCCTCGGGAGCGCGCTGCGAGGTCTGCAGGAAGACGTGCGGCTCCTCTGACGTGCTG
GCCGGCGTGCGCTGCGAGTGGTGCGGGGTCCAGGCGCACTCCCTCTGCTCCGCGGCGCTGGCTCCCGAGT
GTGGCTTCGGGCGTCTGCGCTCCCTGGTCCTGCCTCCCGCGTGCGTGCGCCTTCTGCCCGGCGGCTTCAG
CAAGACGCAGAGCTTCCGCATCGTGGAGGCCGCGGAGCCGGGCGAGGGGGGCGACGGCGCCGACGGGAGC
GCTGCCGTGGGTCCAGGCAGAGAGACACAGGCAACTCCGGAGTCCGGGAAGCAAACGCTGAAGATCTTTG
ATGGCGACGACGCGGTGAGAAGAAGCCAGTTCCGCCTCGTCACGGTGTCCCGCCTGGCCGGTGCCGAGGA
GGTGCTGGAGGCCGCACTGCGGGCCCACCACATCCCCGAGGACCCTGGCCACCTGGAGCTGTGCCGGCTG
CCCCCTTCCTCTCAGGCCTGTGACGCCTGGGCTGGGGGCAAGGCTGGGAGTGCTGTGATCTCGGAGGAGG
GCAGAAGCCCCGGGTCCGGCGAGGCCACGCCAGAGGCCTGGGTCATCCGGGCTCTGCCGCGGGCCCAGGA
GGTCCTGAAGATCTACCCTGGCTGGCTCAAGGTGGGCGTGGCCTACGTGTCCGTGCGAGTGACCCCGAAG
AGCACGGCCCGCTCTGTGGTGCTGGAGGTCCTGCCGCTGCTCGGCCGCCAGGCCGAGAGTCCCGAGAGCT
TCCAGCTGGTGGAGGTGGCGATGGGCTGCAGGCACGTCCAGCGGACGATGCTGATGGACGAACAGCCCCT
GCTGGACCGGCTACAGGACATCCGGCAGATGTCTGTGCGGCAGGTGAGCCAGACGCGGTTCTACGTGGCA
GAGAGCAGGGATGTAGCCCCGCACGTCTCCCTGTTTGTTGGCGGCCTGCCTCCCGGCCTGTCTCCCGAGG
AGTACAGCAGCCTGCTGCATGAGGCCGGGGCTACCAAAGCCACCGTGGTGTCCGTGAGTCACATCTACTC
CTCCCAAGGCGCGGTAGTGTTGGACGTTGCCTGCTTTGCGGAGGCCGAGCGGCTGTACATGCTGCTGAAG
GACATGGCTGTGCGGGGCCGGCTGCTCACTGCCCTGGTGCTCCCCGACCTGCTGCACGCGAAGCTGCCCC
CAGACAGCTGTCCCCTCCTTGTGTTCGTGAACCCCAAGAGTGGAGGCCTCAAGGGCCGAGACCTGCTCTG
CAGCTTCCGGAAGCTACTGAACCCTCATCAGGTCTTCGACCTGACCAACGGAGGTCCTCTTCCCGGGCTC
CACCTGTTCTCCCAGGTGCCCTGCTTCCGGGTGCTGGTGTGTGGTGGCGATGGCACTGTGGGCTGGGTGC
TTGGCGCCCTGGAGGAGACACGGTACCGACTGGCCTGCCCGGAGCCTTCTGTGGCCATCCTGCCCCTGGG
CACAGGGAATGACCTTGGTCGAGTCCTCCGCTGGGGGGCGGGCTACAGCGGCGAGGACCCGTTCTCCGTA
CTGCTGTCTGTGGACGAGGCCGACGCCGTGCTCATGGACCGCTGGACCATCCTGCTGGATGCCCACGAGG
CTGGCAGTGCAGAGAACGACACGGCAGACGCAGAGCCCCCCAAGATCGTGCAGATGAGTAACTACTGTGG
CATTGGCATCGACGCGGAGCTGAGCCTGGACTTCCACCAGGCACGGGAAGAGGAGCCTGGCAAGTTCACA
AGCAGGCTGCACAACAAGGGTGTGTACGTGCGGGTGGGGCTGCAGAAGATCAGTCACTCTCGGAGCCTGC
ACAAGCAGATCCGGCTGCAGGTGGAGCGGCAGGAGGTGGAGCTGCCCAGTATTGAAGGCCTCATCTTCAT
CAACATCCCCAGCTGGGGCTCGGGGGCCGACCTGTGGGGCTCCGACAGCGACACCAGGTTTGAGAAGCCA
CGCATGGACGACGGGCTGCTGGAGGTTGTGGGCGTGACGGGCGTCGTGCACATGGGCCAGGTCCAGGGTG
GGCTGCGCTCCGGAATCCGGATTGCCCAGGGTTCCTACTTCCGAGTCACGCTCCTCAAGGCCACCCCGGT
GCAGGTGGACGGGGAGCCCTGGGTCCAGGCCCCGGGGCACATGATCATCTCAGCTGCTGGCCCTAAGGTG
CACATGCTGAGGAAGGCCAAGCAGAAGCCGAGGAGGGCCGGGACCACCAGGGATGCCCGGGCGGATGCTG
CGCCTGCCCCTGAGAGCGATCCTAGGTAG

Translation (942 aa):
MAAAAEPGARAWLGGGSPRPGSPACSPVLGSGGRARPGPGPGPGPERAGVRAPGPAAAPGHSFRKVTLTK
PTFCHLCSDFIWGLAGFLCDVCNFMSHEKCLKHVRIPCTSVAPSLVRVPVAHCFGPRGLHKRKFCAVCRK
VLEAPALHCEVCELHLHPDCVPFACSDCRQCHQDGHQDHDTHHHHWREGNLPSGARCEVCRKTCGSSDVL
AGVRCEWCGVQAHSLCSAALAPECGFGRLRSLVLPPACVRLLPGGFSKTQSFRIVEAAEPGEGGDGADGS
AAVGPGRETQATPESGKQTLKIFDGDDAVRRSQFRLVTVSRLAGAEEVLEAALRAHHIPEDPGHLELCRL
PPSSQACDAWAGGKAGSAVISEEGRSPGSGEATPEAWVIRALPRAQEVLKIYPGWLKVGVAYVSVRVTPK
STARSVVLEVLPLLGRQAESPESFQLVEVAMGCRHVQRTMLMDEQPLLDRLQDIRQMSVRQVSQTRFYVA
ESRDVAPHVSLFVGGLPPGLSPEEYSSLLHEAGATKATVVSVSHIYSSQGAVVLDVACFAEAERLYMLLK
DMAVRGRLLTALVLPDLLHAKLPPDSCPLLVFVNPKSGGLKGRDLLCSFRKLLNPHQVFDLTNGGPLPGL
HLFSQVPCFRVLVCGGDGTVGWVLGALEETRYRLACPEPSVAILPLGTGNDLGRVLRWGAGYSGEDPFSV
LLSVDEADAVLMDRWTILLDAHEAGSAENDTADAEPPKIVQMSNYCGIGIDAELSLDFHQAREEEPGKFT
SRLHNKGVYVRVGLQKISHSRSLHKQIRLQVERQEVELPSIEGLIFINIPSWGSGADLWGSDSDTRFEKP
RMDDGLLEVVGVTGVVHMGQVQGGLRSGIRIAQGSYFRVTLLKATPVQVDGEPWVQAPGHMIISAAGPKV
HMLRKAKQKPRRAGTTRDARADAAPAPESDPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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