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Report for CCDS33613.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33613.1 Public Homo sapiens 22 YDJC 24 110 108 CCDS HistoryNCBI Gene:150223Re-query CCDS DB by CCDS ID:33613.1Re-query CCDS DB by GeneID:150223See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33613.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292778.11 ENSP00000292778.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292778.11Link to Ensembl Protein Viewer:ENSP00000292778.6Re-query CCDS DB by Nucleotide ID:ENST00000292778Re-query CCDS DB by Protein ID:ENSP00000292778
Original member Current member NCBI NM_001017964.2 NP_001017964.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001017964.2Link to Protein Sequence:NP_001017964.1Re-query CCDS DB by Nucleotide ID:NM_001017964Re-query CCDS DB by Protein ID:NP_001017964Link to BLAST:NP_001017964.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017964.1 323 A8MPS7-1 323 100% 0 0

Chromosomal Locations for CCDS 33613.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 21628418 21628787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21629010 21629187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21629308 21629407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21629602 21629761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21629851 21630014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGTCCCGCCCTCGCATGCGCCTGGTGGTCACCGCGGACGACTTTGGTTACTGCCCGCGACGCGATGAGG
GTATCGTGGAGGCCTTTCTGGCCGGGGCTGTGACCAGCGTGTCCCTGCTGGTCAACGGTGCGGCCACGGA
GAGCGCGGCGGAGCTGGCCCGCAGGCACAGCATCCCCACGGGCCTCCACGCCAACCTGTCCGAGGGCCGC
CCCGTGGGTCCGGCCCGCCGTGGCGCCTCATCGCTGCTCGGCCCGGAAGGCTTCTTCCTTGGCAAGATGG
GATTCCGGGAGGCGGTGGCGGCCGGAGACGTGGATTTGCCTCAGGTGCGGGAGGAGCTCGAGGCCCAACT
AAGCTGCTTCCGGGAGCTGCTGGGCAGGGCCCCCACGCACGCGGACGGGCACCAGCACGTGCACGTGCTC
CCAGGCGTGTGCCAGGTGTTCGCCGAGGCGCTGCAGGCCTATGGGGTGCGCTTTACGCGACTGCCGCTGG
AGCGCGGTGTGGGTGGCTGCACTTGGCTGGAGGCCCCCGCGCGTGCCTTCGCCTGCGCCGTGGAGCGCGA
CGCCCGGGCCGCCGTGGGCCCCTTCTCCCGCCACGGCCTGCGGTGGACAGACGCCTTCGTGGGCCTGAGC
ACTTGCGGCCGGCACATGTCCGCTCACCGCGTGTCCGGGGCCCTGGCGCGGGTCCTGGAAGGTACCCTAG
CGGGCCACACCCTGACAGCCGAGCTGATGGCGCACCCCGGCTACCCCAGTGTGCCTCCCACCGGCGGCTG
CGGTGAAGGCCCCGACGCTTTCTCTTGCTCTTGGGAGCGGCTGCATGAGCTGCGCGTCCTCACCGCGCCC
ACGCTGCGGGCCCAGCTTGCCCAGGATGGCGTGCAGCTTTGCGCCCTCGACGACCTGGACTCCAAGAGGC
CAGGGGAGGAGGTCCCCTGTGAGCCCACTCTGGAACCCTTCCTGGAACCCTCCCTACTCTGA

Translation (323 aa):
MSRPRMRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIPTGLHANLSEGR
PVGPARRGASSLLGPEGFFLGKMGFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVL
PGVCQVFAEALQAYGVRFTRLPLERGVGGCTWLEAPARAFACAVERDARAAVGPFSRHGLRWTDAFVGLS
TCGRHMSAHRVSGALARVLEGTLAGHTLTAELMAHPGYPSVPPTGGCGEGPDAFSCSWERLHELRVLTAP
TLRAQLAQDGVQLCALDDLDSKRPGEEVPCEPTLEPFLEPSLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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