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Report for CCDS33632.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33632.2 Public Homo sapiens 22 CCDC157 24 110 108 CCDS HistoryNCBI Gene:550631Re-query CCDS DB by CCDS ID:33632.2Re-query CCDS DB by GeneID:550631See the combined annotation on chromosome 22 in Sequence Viewer

Public Note for CCDS 33632.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 33632.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338306.8 ENSP00000343087.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338306.8Link to Ensembl Protein Viewer:ENSP00000343087.3Re-query CCDS DB by Nucleotide ID:ENST00000338306Re-query CCDS DB by Protein ID:ENSP00000343087
Original member Current member EBI ENST00000405659.5 ENSP00000385357.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405659.5Link to Ensembl Protein Viewer:ENSP00000385357.1Re-query CCDS DB by Nucleotide ID:ENST00000405659Re-query CCDS DB by Protein ID:ENSP00000385357
Original member Current member NCBI NM_001017437.5 NP_001017437.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001017437.5Link to Protein Sequence:NP_001017437.3Re-query CCDS DB by Nucleotide ID:NM_001017437Re-query CCDS DB by Protein ID:NP_001017437Link to BLAST:NP_001017437.3
Original member Current member NCBI NM_001318334.2 NP_001305263.2 Accepted alive Link to Nucleotide Sequence:NM_001318334.2Link to Protein Sequence:NP_001305263.2Re-query CCDS DB by Nucleotide ID:NM_001318334Re-query CCDS DB by Protein ID:NP_001305263Link to BLAST:NP_001305263.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017437.3 752 Q569K6 752 100% 0 0
NP_001305263.2 752 Q569K6 752 100% 0 0

Chromosomal Locations for CCDS 33632.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 30366001 30366248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30369432 30369603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30370326 30370950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30371650 30371727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30372075 30372286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30373597 30373764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30373923 30374091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30375479 30375663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30376259 30376347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30376433 30376745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2259 nt):
ATGGCGCACCTGCTGGGCAGCCAGGCCTGCATGGAGAGCCTGCGCACAGACCTCACCGACCTGCAGGGTG
CCATCGTAGACGTCTTCTCCCGCGCCGGGCCTGTGCGCTTCCCCTCCTGGAAGTTCCCTGACCGCATGGC
CTGTGACCTCGACATGGTGGCCCTGCTGGAGCACTATGACCATGTTCCGGGTGACCCCGAGTTCACGCAG
CTGTCCCATGCCGTGCTGCTGGAGCTGGTCATCGACAGGCTCCTGCTGCTGCTTCAAAGCTGTATGAGCT
ACTTGGAGAACCTTGGCTCAGAGCAGATGATGCCCCCTGCACAGGCTGCGGGGCCCTGCATGTCCGTGGG
GCTCACGGTGCGGCGCTTCTGGGACAGCCTGCTGAGGCTGGGCACGCTCCACCAGCAGCCACTCCCCCAG
AAAGGGGCAAACCAAAGGGAGACTCCCACCTCCAAGCCCACCACCAAGGGCGAGCCAGCCAGGAGCCCTG
AATATCTGACTACCAAGTTAATCAAGCCCTCCTCCCCAGTGCTAGGCTTGCCCCAGACCTGCCAAGAGCC
AGAGAGCATCCCTGTCAGAGCCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCAC
TCCCAGACCATTGAGACGGCCCTGGTGCCCTGTGACGCATGCGCCAGCGTCCAGGGAAGCCTGCAGAAGG
TGGGCAAGGTGGTCATCAGCCTGTGTCAGAGCCAGAACCTGCCCTCGTCCTTAGGCCAGTTCCAGCAACT
GGTGCAGGACAGCATGGGGCTCAGGCCACTGCCGGCTGCCACCGTGGGCCGCTGGGCAGCAGAGCAGAGG
AAAGACCTGACGCGCCTCAGTAAGCATGTGGAGGCCCTCAGGGCCCAGCTGGAGGAGGCTGAAGGGCAGA
AGGATGGCCTGAGGAAGCAGGCGGGCAAGCTGGAGCAGGCGCTGAAACAGGAGCAGGGGGCACGGCGGCG
ACAGGCGGAGGAGGATGAGCAGTGCCTGTCTGAGTGGGAGCACGACAAACAGCAGCTGCTCACAGAAACA
AGTGACCTAAAGACAAAGATGGCCACCCTGGAGAGAGAACTGAAACAGCAGCGGGAGTCCACACAGGCTG
TGGAGGCAAAGGCCCAGCAGCTGCAGGAGGAAGGTGAGCGCAGGGCGGCAGCGGAGAGGCAGGTGCAGCA
GCTGGAGGAGCAGGTGCAGCAGTTGGAGGCGCAGGTGCAGCTGTTGGTGGGTCGGCTGGAGGGCGCTGGC
CAGCAGGTCTGCTGGGCCAGCACGGAGCTGGATAAGGAGAAGGCCCGTGTCGACAGCATGGTCCGCCACC
AGGAGTCTCTGCAGGCCAAGCAGCGAGCCCTGCTAAAGCAGCTGGACAGCCTGGACCAGGAACGTGAGGA
GCTGCGGGGCAGCCTGGACGAGGCTGAGGCCCAGCGGGCCCGCGTGGAGGAGCAGCTGCAGAGCGAGCGG
GAGCAGGGGCAATGCCAGCTCAGGGCCCAGCAGGAGCTGCTGCAGAGCCTGCAGAGGGAGAAGCAAGGCC
TGGAGCAGGCGACTACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGGA
GCGGGAGCGGCTGCTGGTGGCCTTCCCAGACCTGCACAGGCCCACCGAGACCCAGATCCATGGAGGCAGA
TCCAGCAGCGTGGAATCCCAGATAACATGTCCCACAGACTCTGGCAACGTCACAGATCACATGGAGAGGC
AAGTGCAGTCCAACGACATCCGCATCCGGGTCCTACAGGAGGAGAACGGGCGGCTCCAATCAATGCTGTC
CAAAATCCGGGAAGTGGCCCAGCAGGGTGGCCTCAAGCTGATCCCGCAGGACCGGCTCTGGTCCCCTTCC
AGCAAGGGAACCCAGGGAGCAACACCACCAGTCCAGGCCAAGAGCACATCCCCAGGGCCTCTGGGCAGAC
AGCACCTTCCTAGCAGCAGGACGGGTAGGACCCTGCTGGGCCAGCCCTGCACATCCCCACCTCGGCAGCC
CTGCACATCCCCACCTCGGCAGCCCTGCACATCCCCACCTCGGCAGCCCTGCACATCCCCATCTCGGCAG
CCCTGCAGCCAGCCCAGCAAGTCCTTGCTGGAGGGTGTGACCCACTTGGACACCTGCACCCAGAACCCCA
TCAAGGTCTTGGTCAGGCTGAGAAAGAGACTGTCACCTGGCCGGGGACAGGCCAGCTCTGCACACCAGCC
CCAGGAGCGGCCCATGTAG

Translation (752 aa):
MAHLLGSQACMESLRTDLTDLQGAIVDVFSRAGPVRFPSWKFPDRMACDLDMVALLEHYDHVPGDPEFTQ
LSHAVLLELVIDRLLLLLQSCMSYLENLGSEQMMPPAQAAGPCMSVGLTVRRFWDSLLRLGTLHQQPLPQ
KGANQRETPTSKPTTKGEPARSPEYLTTKLIKPSSPVLGLPQTCQEPESIPVRASLQFPATTFKNTRSVH
SQTIETALVPCDACASVQGSLQKVGKVVISLCQSQNLPSSLGQFQQLVQDSMGLRPLPAATVGRWAAEQR
KDLTRLSKHVEALRAQLEEAEGQKDGLRKQAGKLEQALKQEQGARRRQAEEDEQCLSEWEHDKQQLLTET
SDLKTKMATLERELKQQRESTQAVEAKAQQLQEEGERRAAAERQVQQLEEQVQQLEAQVQLLVGRLEGAG
QQVCWASTELDKEKARVDSMVRHQESLQAKQRALLKQLDSLDQEREELRGSLDEAEAQRARVEEQLQSER
EQGQCQLRAQQELLQSLQREKQGLEQATTDLRLTILELERELEELKERERLLVAFPDLHRPTETQIHGGR
SSSVESQITCPTDSGNVTDHMERQVQSNDIRIRVLQEENGRLQSMLSKIREVAQQGGLKLIPQDRLWSPS
SKGTQGATPPVQAKSTSPGPLGRQHLPSSRTGRTLLGQPCTSPPRQPCTSPPRQPCTSPPRQPCTSPSRQ
PCSQPSKSLLEGVTHLDTCTQNPIKVLVRLRKRLSPGRGQASSAHQPQERPM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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