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Report for CCDS33632.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
33632.2 |
Public |
Homo sapiens |
22 |
CCDC157 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:550631](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:33632.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:550631](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 22 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public Note for CCDS 33632.1 |
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data. |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 33632.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000338306.8 |
ENSP00000343087.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000338306.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000343087.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000338306](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000343087](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000405659.5 |
ENSP00000385357.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000405659.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000385357.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000405659](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000385357](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001017437.5 |
NP_001017437.3 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001017437.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001017437.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001017437](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001017437](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001017437.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318334.2 |
NP_001305263.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318334.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305263.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318334](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305263](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305263.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 33632.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2259 nt): ATGGCGCACCTGCTGGGCAGCCAGGCCTGCATGGAGAGCCTGCGCACAGACCTCACCGACCTGCAGGGTG CCATCGTAGACGTCTTCTCCCGCGCCGGGCCTGTGCGCTTCCCCTCCTGGAAGTTCCCTGACCGCATGGC CTGTGACCTCGACATGGTGGCCCTGCTGGAGCACTATGACCATGTTCCGGGTGACCCCGAGTTCACGCAG CTGTCCCATGCCGTGCTGCTGGAGCTGGTCATCGACAGGCTCCTGCTGCTGCTTCAAAGCTGTATGAGCT ACTTGGAGAACCTTGGCTCAGAGCAGATGATGCCCCCTGCACAGGCTGCGGGGCCCTGCATGTCCGTGGG GCTCACGGTGCGGCGCTTCTGGGACAGCCTGCTGAGGCTGGGCACGCTCCACCAGCAGCCACTCCCCCAG AAAGGGGCAAACCAAAGGGAGACTCCCACCTCCAAGCCCACCACCAAGGGCGAGCCAGCCAGGAGCCCTG AATATCTGACTACCAAGTTAATCAAGCCCTCCTCCCCAGTGCTAGGCTTGCCCCAGACCTGCCAAGAGCC AGAGAGCATCCCTGTCAGAGCCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCAC TCCCAGACCATTGAGACGGCCCTGGTGCCCTGTGACGCATGCGCCAGCGTCCAGGGAAGCCTGCAGAAGG TGGGCAAGGTGGTCATCAGCCTGTGTCAGAGCCAGAACCTGCCCTCGTCCTTAGGCCAGTTCCAGCAACT GGTGCAGGACAGCATGGGGCTCAGGCCACTGCCGGCTGCCACCGTGGGCCGCTGGGCAGCAGAGCAGAGG AAAGACCTGACGCGCCTCAGTAAGCATGTGGAGGCCCTCAGGGCCCAGCTGGAGGAGGCTGAAGGGCAGA AGGATGGCCTGAGGAAGCAGGCGGGCAAGCTGGAGCAGGCGCTGAAACAGGAGCAGGGGGCACGGCGGCG ACAGGCGGAGGAGGATGAGCAGTGCCTGTCTGAGTGGGAGCACGACAAACAGCAGCTGCTCACAGAAACA AGTGACCTAAAGACAAAGATGGCCACCCTGGAGAGAGAACTGAAACAGCAGCGGGAGTCCACACAGGCTG TGGAGGCAAAGGCCCAGCAGCTGCAGGAGGAAGGTGAGCGCAGGGCGGCAGCGGAGAGGCAGGTGCAGCA GCTGGAGGAGCAGGTGCAGCAGTTGGAGGCGCAGGTGCAGCTGTTGGTGGGTCGGCTGGAGGGCGCTGGC CAGCAGGTCTGCTGGGCCAGCACGGAGCTGGATAAGGAGAAGGCCCGTGTCGACAGCATGGTCCGCCACC AGGAGTCTCTGCAGGCCAAGCAGCGAGCCCTGCTAAAGCAGCTGGACAGCCTGGACCAGGAACGTGAGGA GCTGCGGGGCAGCCTGGACGAGGCTGAGGCCCAGCGGGCCCGCGTGGAGGAGCAGCTGCAGAGCGAGCGG GAGCAGGGGCAATGCCAGCTCAGGGCCCAGCAGGAGCTGCTGCAGAGCCTGCAGAGGGAGAAGCAAGGCC TGGAGCAGGCGACTACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGGA GCGGGAGCGGCTGCTGGTGGCCTTCCCAGACCTGCACAGGCCCACCGAGACCCAGATCCATGGAGGCAGA TCCAGCAGCGTGGAATCCCAGATAACATGTCCCACAGACTCTGGCAACGTCACAGATCACATGGAGAGGC AAGTGCAGTCCAACGACATCCGCATCCGGGTCCTACAGGAGGAGAACGGGCGGCTCCAATCAATGCTGTC CAAAATCCGGGAAGTGGCCCAGCAGGGTGGCCTCAAGCTGATCCCGCAGGACCGGCTCTGGTCCCCTTCC AGCAAGGGAACCCAGGGAGCAACACCACCAGTCCAGGCCAAGAGCACATCCCCAGGGCCTCTGGGCAGAC AGCACCTTCCTAGCAGCAGGACGGGTAGGACCCTGCTGGGCCAGCCCTGCACATCCCCACCTCGGCAGCC CTGCACATCCCCACCTCGGCAGCCCTGCACATCCCCACCTCGGCAGCCCTGCACATCCCCATCTCGGCAG CCCTGCAGCCAGCCCAGCAAGTCCTTGCTGGAGGGTGTGACCCACTTGGACACCTGCACCCAGAACCCCA TCAAGGTCTTGGTCAGGCTGAGAAAGAGACTGTCACCTGGCCGGGGACAGGCCAGCTCTGCACACCAGCC CCAGGAGCGGCCCATGTAG
Translation (752 aa): MAHLLGSQACMESLRTDLTDLQGAIVDVFSRAGPVRFPSWKFPDRMACDLDMVALLEHYDHVPGDPEFTQ LSHAVLLELVIDRLLLLLQSCMSYLENLGSEQMMPPAQAAGPCMSVGLTVRRFWDSLLRLGTLHQQPLPQ KGANQRETPTSKPTTKGEPARSPEYLTTKLIKPSSPVLGLPQTCQEPESIPVRASLQFPATTFKNTRSVH SQTIETALVPCDACASVQGSLQKVGKVVISLCQSQNLPSSLGQFQQLVQDSMGLRPLPAATVGRWAAEQR KDLTRLSKHVEALRAQLEEAEGQKDGLRKQAGKLEQALKQEQGARRRQAEEDEQCLSEWEHDKQQLLTET SDLKTKMATLERELKQQRESTQAVEAKAQQLQEEGERRAAAERQVQQLEEQVQQLEAQVQLLVGRLEGAG QQVCWASTELDKEKARVDSMVRHQESLQAKQRALLKQLDSLDQEREELRGSLDEAEAQRARVEEQLQSER EQGQCQLRAQQELLQSLQREKQGLEQATTDLRLTILELERELEELKERERLLVAFPDLHRPTETQIHGGR SSSVESQITCPTDSGNVTDHMERQVQSNDIRIRVLQEENGRLQSMLSKIREVAQQGGLKLIPQDRLWSPS SKGTQGATPPVQAKSTSPGPLGRQHLPSSRTGRTLLGQPCTSPPRQPCTSPPRQPCTSPPRQPCTSPSRQ PCSQPSKSLLEGVTHLDTCTQNPIKVLVRLRKRLSPGRGQASSAHQPQERPM
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