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Report for CCDS33797.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33797.1 Public Homo sapiens 3 OR5H1 24 110 108 CCDS HistoryNCBI Gene:26341Re-query CCDS DB by CCDS ID:33797.1Re-query CCDS DB by GeneID:26341See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33797.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641874.1 ENSP00000492953.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641874.1Link to Ensembl Protein Viewer:ENSP00000492953.1Re-query CCDS DB by Nucleotide ID:ENST00000641874Re-query CCDS DB by Protein ID:ENSP00000492953
Original member Current member NCBI NM_001005338.2 NP_001005338.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005338.2Link to Protein Sequence:NP_001005338.1Re-query CCDS DB by Nucleotide ID:NM_001005338Re-query CCDS DB by Protein ID:NP_001005338Link to BLAST:NP_001005338.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005338.1 313 A6NKK0 313 100% 0 0

Chromosomal Locations for CCDS 33797.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 98132698 98133639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGAAGAGGAAAATGCAACATTGCTGACAGAGTTTGTTCTCACAGGATTTTTATATCAACCACAGTGGA
AAATACCCCTGTTCCTGGCATTCTTGGTAATATATCTCATCACCATCATGGGGAATCTTGGTCTGATTGC
TGTCATCTGGAAAGACCCTCACCTTCATATCCCAATGTACTTACTCCTTGGGAATTTAGCTTTTGTGGAT
GCTTGGATATCATCCACAGTGACCCCAAAGATGCTGAATAACTTCTTAGCTAAGAGTAAGATGATATCTC
TCTCTGAATGCAAGATACAGTTTTTTTCGTTTGCAATCAGTGTAACCACGGAATGTTTTCTCTTGGCAAC
GATGGCATATGATCGCTATGTAGCCATATGCAAACCTTTACTTTATCCAGCCATTATGACCAATGGACTG
TGCATCCGGCTATTAATCTTGTCATATGTAGGTGGTATTCTTCATGCTTTAATCCATGAAGGATTTTTAT
TCAGACTAACCTTCTGTAACTCCAACATAGTACATCACATTTACTGTGACACTATCCCATTGTCTAAGAT
TTCTTGTACTGATTCTTCTATTAATTTTCTAATGGTTTTTATTTTCTCAGGTTCAATTCAGGTATTCAGC
ATTGTGACTATTCTTGTATCTTATACATTTGTTCTCTTCGCAATCTTAAAAAAGAAATCTGATAAAGGTG
TAAGGAAAGCCTTTTCCACCTGTGGAGCCCATCTCTTCTCTGTCTCTTTATACTATGGACCCCTTCTCTT
CATTTATGTGGGCCCTGCATCTCCGCAAGCAGATGATCAAGATATGGTGGAGCCTCTATTCTACACTGTC
ATCATTCCTTTGTTAAATCCTATCATCTACAGTCTGAGAAATAAGCAAGTCACAGTTTCATTCACAAAAA
TGTTAAAAAAACATGTTAAGGTTTCATACTAA

Translation (313 aa):
MEEENATLLTEFVLTGFLYQPQWKIPLFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMYLLLGNLAFVD
AWISSTVTPKMLNNFLAKSKMISLSECKIQFFSFAISVTTECFLLATMAYDRYVAICKPLLYPAIMTNGL
CIRLLILSYVGGILHALIHEGFLFRLTFCNSNIVHHIYCDTIPLSKISCTDSSINFLMVFIFSGSIQVFS
IVTILVSYTFVLFAILKKKSDKGVRKAFSTCGAHLFSVSLYYGPLLFIYVGPASPQADDQDMVEPLFYTV
IIPLLNPIIYSLRNKQVTVSFTKMLKKHVKVSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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