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Report for CCDS33864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33864.1 Public Homo sapiens 3 FAIM 24 110 108 CCDS HistoryNCBI Gene:55179Re-query CCDS DB by CCDS ID:33864.1Re-query CCDS DB by GeneID:55179See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33864.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338446.8 ENSP00000342805.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338446.8Link to Ensembl Protein Viewer:ENSP00000342805.4Re-query CCDS DB by Nucleotide ID:ENST00000338446Re-query CCDS DB by Protein ID:ENSP00000342805
Original member Current member NCBI NM_001033030.2 NP_001028202.1 Accepted alive Link to Nucleotide Sequence:NM_001033030.2Link to Protein Sequence:NP_001028202.1Re-query CCDS DB by Nucleotide ID:NM_001033030Re-query CCDS DB by Protein ID:NP_001028202Link to BLAST:NP_001028202.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028202.1 213 Q9NVQ4-2 213 100% 0 0

Chromosomal Locations for CCDS 33864.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 138610958 138611037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138621407 138621539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138622188 138622416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138629107 138629156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138632930 138633079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGCTGCTTCCCTTTATAAGGACACTCCCACTGTTGTGCTATAATCATCTCTTGGTATCTCCGGACTCTG
CCACTCTGAGCCCTCCTTACAGCCTAGAAAAAATGACAGATCTCGTAGCTGTTTGGGATGTTGCTTTAAG
TGACGGAGTCCACAAGATCGAATTTGAACATGGGACTACATCAGGCAAACGAGTAGTATATGTAGATGGA
AAGGAAGAGATAAGAAAAGAGTGGATGTTCAAATTAGTGGGCAAAGAAACATTCTATGTTGGAGCTGCAA
AGACAAAAGCGACCATAAATATAGACGCTATCAGTGGTTTTGCTTATGAATATACTCTGGAAATTAATGG
GAAAAGTCTCAAGAAGTATATGGAGGACAGATCAAAAACCACCAATACTTGGGTATTACACATGGATGGT
GAGAACTTTAGAATTGTTTTGGAAAAAGATGCTATGGACGTATGGTGCAATGGTAAAAAATTGGAGACAG
CGGGTGAGTTTGTAGATGATGGGACTGAAACTCACTTCAGTATCGGGAACCATGACTGTTACATAAAGGC
TGTCAGTAGTGGGAAGCGGAAAGAAGGGATTATTCATACTCTCATTGTGGATAATAGAGAAATCCCAGAG
ATTGCAAGTTAA

Translation (213 aa):
MLLPFIRTLPLLCYNHLLVSPDSATLSPPYSLEKMTDLVAVWDVALSDGVHKIEFEHGTTSGKRVVYVDG
KEEIRKEWMFKLVGKETFYVGAAKTKATINIDAISGFAYEYTLEINGKSLKKYMEDRSKTTNTWVLHMDG
ENFRIVLEKDAMDVWCNGKKLETAGEFVDDGTETHFSIGNHDCYIKAVSSGKRKEGIIHTLIVDNREIPE
IAS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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