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Report for CCDS34515.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34515.1 Public Homo sapiens 6 RFPL4B 24 110 108 CCDS HistoryNCBI Gene:442247Re-query CCDS DB by CCDS ID:34515.1Re-query CCDS DB by GeneID:442247See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34515.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000441065.3 ENSP00000423391.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000441065.3Link to Ensembl Protein Viewer:ENSP00000423391.1Re-query CCDS DB by Nucleotide ID:ENST00000441065Re-query CCDS DB by Protein ID:ENSP00000423391
Original member Current member NCBI NM_001013734.3 NP_001013756.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013734.3Link to Protein Sequence:NP_001013756.2Re-query CCDS DB by Nucleotide ID:NM_001013734Re-query CCDS DB by Protein ID:NP_001013756Link to BLAST:NP_001013756.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013756.2 263 Q6ZWI9 263 100% 0 0

Chromosomal Locations for CCDS 34515.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 112349709 112350500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGGCCAAACGCCTGCAAGCAGAGTTGTCCTGTCCAGTTTGCCTGGATTTTTTCTCCTGTTCCATTTCTC
TCTCTTGTACACACGTGTTCTGCTTTGATTGCATCCAGAGGTATATACTAGAAAACCATGATTTTAGAGC
GATGTGCCCCTTGTGTCGAGACGTGGTGAAGGTACCTGCTTTGGAAGAATGGCAAGTGAGCGTCCTAACA
CTTATGACCAAGCAGCACAATAGCCGACTTGAGCAAAGTCTGCACGTGAGGGAGGAGCTCCGGCATTTTC
GGGAGGATGTGACCCTGGATGCAGCCACTGCCAGCTCCCTCCTTGTCTTCTCCAATGATCTAAGAAGCGC
TCAGTGTAAGAAGATCCACCACGATCTGACAAAAGATCCCAGGCTGGCCTGTGTCCTGGGTACTCCCTGC
TTCTCCTCCGGCCAACATTACTGGGAGGTTGAAGTGGGAGAGGTGAAGTCATGGTCCCTGGGCGTCTGCA
AGGAGCCGGCTGACAGAAAGAGCAATGATTTATTCCCTGAGCATGGCTTCTGGATCAGCATGAAGGCAGG
AGCAATCCATGCTAACACCCACCTGGAGAGAATTCCTGCAAGCCCTCGCCTTCGCCGTGTGGGAATTTTC
CTGGATGCTGACTTAGAAGAAATCCAGTTTTTTGATGTTGACAATAATGTCCTCATCTATACACATGATG
GTTTCTTCTCTTTGGAGCTTTTGTGTCCATTCTTCTGTCTTGAGCTCTTGGGAGAAGGGGAGAGTGGCAA
CGTCCTGACCATCTGCCCATGA

Translation (263 aa):
MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVVKVPALEEWQVSVLT
LMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQCKKIHHDLTKDPRLACVLGTPC
FSSGQHYWEVEVGEVKSWSLGVCKEPADRKSNDLFPEHGFWISMKAGAIHANTHLERIPASPRLRRVGIF
LDADLEEIQFFDVDNNVLIYTHDGFFSLELLCPFFCLELLGEGESGNVLTICP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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