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Report for CCDS34533.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34533.1 Public Homo sapiens 6 C6orf58 24 110 108 CCDS HistoryNCBI Gene:352999Re-query CCDS DB by CCDS ID:34533.1Re-query CCDS DB by GeneID:352999See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34533.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329722.8 ENSP00000328069.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329722.8Link to Ensembl Protein Viewer:ENSP00000328069.7Re-query CCDS DB by Nucleotide ID:ENST00000329722Re-query CCDS DB by Protein ID:ENSP00000328069
Original member Current member NCBI NM_001010905.3 NP_001010905.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010905.3Link to Protein Sequence:NP_001010905.1Re-query CCDS DB by Nucleotide ID:NM_001010905Re-query CCDS DB by Protein ID:NP_001010905Link to BLAST:NP_001010905.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010905.1 330 Q6P5S2 330 100% 0 0

Chromosomal Locations for CCDS 34533.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 127577186 127577486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127578686 127578772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127580265 127580449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127581182 127581282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127590087 127590325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 127591543 127591622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGGCTTTTCTTCCTTCCTGGGTTTGTGTACTAGTTGGTTCCTTTTCTGCTTCCTTAGCAGGGACTTCCA
ATCTCTCAGAGACAGAGCCCCCTCTGTGGAAGGAGAGTCCTGGTCAGCTCAGTGACTACAGGGTGGAGAA
CAGCATGTACATTATTAATCCCTGGGTATACCTTGAGAGAATGGGGATGTATAAAATCATATTGAATCAG
ACAGCCAGGTATTTTGCAAAATTTGCACCAGATAATGAACAGAATATTTTATGGGGGTTGCCTCTGCAGT
ATGGCTGGCAATATAGGACAGGCAGATTAGCTGATCCAACCCGAAGGACAAACTGTGGCTATGAATCTGG
AGATCATATGTGCATCTCTGTGGACAGTTGGTGGGCTGATTTGAATTATTTTCTGTCTTCATTACCCTTT
CTTGCTGCGGTTGATTCTGGTGTAATGGGGATATCATCAGACCAAGTCAGGCTTTTGCCCCCACCCAAGA
ATGAGAGGAAGTTTTGTTATGATGTTTCTAGCTGTCGTTCATCCTTCCCTGAGACAATGAACAAGTGGAA
CACCTTTTACCAGTATTTGCAGTCACCTTTTAGTAAGTTTGATGATCTGTTGAAGTACTTATGGGCTGCA
CACACTTCAACCTTGGCAGATAATATCAAAAGTTTTGAAGACAGATATGATTATTATTCTAAAGCAGAAG
CGCATTTTGAGAGAAGTTGGGTACTGGCTGTGGATCATTTAGCTGCAGTCCTCTTTCCTACAACCTTGAT
TAGATCATATAAGTTCCAGAAGGGCATGCCACCACGAATTCTTCTTAATACTGATGTAGCCCCTTTCATC
AGTGACTTTACTGCTTTTCAGAATGTAGTCCTGGTTCTTCTAAATATGCTTGACAATGTGGATAAATCTA
TAGGTTATCTTTGTACAGAAAAATCTAATGTATATAGAGATCATTCGGAATCTAGCTCTAGAAGTTATGG
AAATAACTCCTGA

Translation (330 aa):
MAFLPSWVCVLVGSFSASLAGTSNLSETEPPLWKESPGQLSDYRVENSMYIINPWVYLERMGMYKIILNQ
TARYFAKFAPDNEQNILWGLPLQYGWQYRTGRLADPTRRTNCGYESGDHMCISVDSWWADLNYFLSSLPF
LAAVDSGVMGISSDQVRLLPPPKNERKFCYDVSSCRSSFPETMNKWNTFYQYLQSPFSKFDDLLKYLWAA
HTSTLADNIKSFEDRYDYYSKAEAHFERSWVLAVDHLAAVLFPTTLIRSYKFQKGMPPRILLNTDVAPFI
SDFTAFQNVVLVLLNMLDNVDKSIGYLCTEKSNVYRDHSESSSRSYGNNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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