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Report for CCDS34576.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34576.1 Public Homo sapiens 6 ERMARD 24 110 108 CCDS HistoryNCBI Gene:55780Re-query CCDS DB by CCDS ID:34576.1Re-query CCDS DB by GeneID:55780See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34576.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366773.8 ENSP00000355735.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366773.8Link to Ensembl Protein Viewer:ENSP00000355735.3Re-query CCDS DB by Nucleotide ID:ENST00000366773Re-query CCDS DB by Protein ID:ENSP00000355735
Original member Current member NCBI NM_018341.3 NP_060811.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018341.3Link to Protein Sequence:NP_060811.1Re-query CCDS DB by Nucleotide ID:NM_018341Re-query CCDS DB by Protein ID:NP_060811Link to BLAST:NP_060811.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060811.1 678 Q5T6L9-1 678 100% 0 0

Chromosomal Locations for CCDS 34576.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 169751658 169751663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169753864 169754032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169755283 169755422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169756338 169756439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169756719 169756808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169758968 169759065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169759838 169759974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169760642 169760756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169762429 169762531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169766638 169766667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169768103 169768171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169769540 169769713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169773319 169773402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169775270 169775346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169775940 169776065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169776455 169776673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169779182 169779295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169781330 169781513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2037 nt):
ATGGAGGTATTAATAGGGGACCCTATTACCACATGTCTTTCTCCCTCAGTGTATGATATAATTTGTAATC
TTGGGTTTCAACTCAGAGAAAATTGTGATATCAATAGCATTGTAACTCAGAATGGTGAAGTATGCTGGAA
AACAATCACAGACTGTGTGAGCTACACAGAGTCAGAGCAGGGTCTGGATTACTGGGGAAGCGTGAGGCTG
CTGGGCCCTGTGTGTGAGGCTGTCCATTCACATTTCTTATCTCTGACCAAGGGGCAATTTGAAATTCGAT
ATGCACCGTGGTTCCAGTGGACAAGTTTTCCAGAGTTATTTCCTGAAATATTTGATGCCTTGGAAAGTCT
ACAATCTCCTGCTATTTCTCTTAGCTTAATGAAACTGACATCGTGTCTAGAACGAGCCTTGGGTGATGTA
TTTTTACTGATTGGGAAGGAATGCCCCTTTCTTTTAAGAGATCTGCTTTCATCTGAGGAGCTTGCTCAAG
TCTTCAGTCAGTCTGTGATGAATGTGCTAAAAGTCTTCGTTGGCTCTCCGTGTGGTCTCAACCTGCGTAA
CGTCTTATGGCATGGGTTTGCGTCACCTGAAGAAATTCCTCCAAAATACTGTTCAATGATGATACTGTTG
ACGGCAGGATTGGGTCAGTTACTGAAGAGTTACCTTCAAAACACTAAACTTACATTGGCACATCGCTCTT
TCATATCTCTTACAAACCTCGAGGATTTGATTGTTTTTCCTGATGTTACTTATGAGGTGCTTTCAGTATT
AGAAGAAGTGATGATGAAATCTGCTTTTATATTAAAAATCATGTTACCATATTGGGAAGTTGCACTGGTC
AAGTTCAAGTCACACAGGTTTGCTGACTGCGCCATATTGTTGCTGACACAACTGGAGACTGGACTTAGGA
ATGTTTTTGCCACACTTAACAGATGTCCAAAAAGACTCCTGACTGCTGAGTCAACAGCTCTTTATACCAC
CTTTGATCAAATATTGGCAAAACACTTGAATGATGGTAAAATCAATCAGCTTCCTCTTTTCCTTGGAGAG
CCTGCTATGGAATTTCTCTGGGATTTCCTGAACCATCAGGAGGGTCCCCGCATAAGAGATCATTTAAGCC
ACGGGGAGATCAACTTACATGAATTTTCAAAAGAAACAACTAATCAGTTGCTTGCATTTTCTCTTGTACT
GCTACTCAGATTCGTTGATGACTGTCTGCTATCAGTTTTTAAGGAAAAATCAGCCGTAGAATTGTTGATT
AGTCTTGCAGAAGGCTATAGTTCTCGCTGTCATCCGGTTTTTCAGCTTAAAAAACAGGTGCTGAGCTGTG
AGGAGAGCATCAGGGTTTGGGCTCTGCTGCCTTTCCCCGAAGAACTCACTCGGCAAGCCGTCAGATTAGA
AGATAATTCTGAAACAAATGCCTGCCACTCTTTGATTACAAAAATGACGGATGAGCTGTATCACCATATG
CCTGAGAATCGTTGTGTGTTAAAGGACTTGGATCGTCTTCCTACTGAGACGTGGCCCCAGCTTCTCCGTG
AGCTCTGCAGCACACCTGTTCCCACCCTGTTCTGCCCCAGGATTGTGCTGGAAGTGCTGGTTGTGCTCCG
AAGCATCAGCGAACAGTGCCGCCGTGTGTCCAGCCAGGTCACCGTTGCCTCAGAGCTGAGACACAGGCAG
TGGGTGGAAAGGACGCTGCGGTCTCGCCAGCGGCAGAACTACCTGCGTATGTGGAGTAGTATCAGACTAC
TGTCCCCTGTGCTCAGCCTGATACTGTTACTCATTGCGCTGGAGTTGGTCAACATTCATGCTGTTTGTGG
GAAGAATGCGCATGAGTATCAGCAGTACCTAAAGTTTGTAAAGTCGATCTTGCAGTACACGGAGAACCTG
GTGGCTTACACCAGTTACGAAAAGAACAAGTGGAATGAAACTATCAATCTTACACATACAGCTTTGTTGA
AAATGTGGACTTTTAGTGAGAAGAAACAAATGTTAATACATTTAGCCAAGAAATCCACAAGTAAAGTACT
CTTATGA

Translation (678 aa):
MEVLIGDPITTCLSPSVYDIICNLGFQLRENCDINSIVTQNGEVCWKTITDCVSYTESEQGLDYWGSVRL
LGPVCEAVHSHFLSLTKGQFEIRYAPWFQWTSFPELFPEIFDALESLQSPAISLSLMKLTSCLERALGDV
FLLIGKECPFLLRDLLSSEELAQVFSQSVMNVLKVFVGSPCGLNLRNVLWHGFASPEEIPPKYCSMMILL
TAGLGQLLKSYLQNTKLTLAHRSFISLTNLEDLIVFPDVTYEVLSVLEEVMMKSAFILKIMLPYWEVALV
KFKSHRFADCAILLLTQLETGLRNVFATLNRCPKRLLTAESTALYTTFDQILAKHLNDGKINQLPLFLGE
PAMEFLWDFLNHQEGPRIRDHLSHGEINLHEFSKETTNQLLAFSLVLLLRFVDDCLLSVFKEKSAVELLI
SLAEGYSSRCHPVFQLKKQVLSCEESIRVWALLPFPEELTRQAVRLEDNSETNACHSLITKMTDELYHHM
PENRCVLKDLDRLPTETWPQLLRELCSTPVPTLFCPRIVLEVLVVLRSISEQCRRVSSQVTVASELRHRQ
WVERTLRSRQRQNYLRMWSSIRLLSPVLSLILLLIALELVNIHAVCGKNAHEYQQYLKFVKSILQYTENL
VAYTSYEKNKWNETINLTHTALLKMWTFSEKKQMLIHLAKKSTSKVLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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