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Report for CCDS3487.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3487.2 Public Homo sapiens 4 DCUN1D4 24 110 108 CCDS HistoryNCBI Gene:23142Re-query CCDS DB by CCDS ID:3487.2Re-query CCDS DB by GeneID:23142See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3487.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381441.7 ENSP00000370850.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381441.7Link to Ensembl Protein Viewer:ENSP00000370850.3Re-query CCDS DB by Nucleotide ID:ENST00000381441Re-query CCDS DB by Protein ID:ENSP00000370850
Original member Current member NCBI NM_015115.4 NP_055930.2 Accepted alive Link to Nucleotide Sequence:NM_015115.4Link to Protein Sequence:NP_055930.2Re-query CCDS DB by Nucleotide ID:NM_015115Re-query CCDS DB by Protein ID:NP_055930Link to BLAST:NP_055930.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055930.2 257 Q92564-2 257 100% 0 0

Chromosomal Locations for CCDS 3487.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 51843243 51843267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51863437 51863507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51863670 51863709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51874271 51874385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51877763 51877854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51886568 51886638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51891760 51891851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51899270 51899378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51913290 51913392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 51913529 51913584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGCACTCGGATGCCGCCGCTGTCAATTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAATATTCATA
AGATCTACCACACCCTTAATAAGCTGAACCTAACAGAAGACATTGGCCAAGACGATCACCAAACAGGAAG
TCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCC
TCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGTATAGAAAATATGATTCGACTAGAA
TAAAGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATGGTTCTATGAATATGCAGGAACTGA
TGATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTGAAGACATTGGTGTTGAACCAGAAAACGTAGTT
ATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACATGGGTTATTTTACTCTACAGGAGTGGTTAAAAG
GAATGACTTCTCTCCAATGTGATACAACAGAAAAACTCAGAAATACTTTGGATTACTTAAGATCATTCTT
AAATGATTCTACAAACTTTAAACTTATTTACAGATATGCGTTTGACTTTGCACGGCAATCAAAATACAAA
GTTATTAATAAAGACCAGTGGTGCAATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCTCAGCAACT
ATGATGAAGATGGAGCATGGCCAGTTTTGTTGGACGAGTTTGTGGAGTGGTATAAAGACAAACAGATGTC
CTAG

Translation (257 aa):
MHSDAAAVNFQLNSHLSTLANIHKIYHTLNKLNLTEDIGQDDHQTGSLRSCSSSDCFNKVMPPRKKRRPA
SGDDLSAKKSRHDSMYRKYDSTRIKTEEEAFSSKRCLEWFYEYAGTDDVVGPEGMEKFCEDIGVEPENVV
MLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFARQSKYK
VINKDQWCNVLEFSRTINLDLSNYDEDGAWPVLLDEFVEWYKDKQMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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