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Report for CCDS35057.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35057.1 Public Homo sapiens 9 TUT7 24 110 108 CCDS HistoryNCBI Gene:79670Re-query CCDS DB by CCDS ID:35057.1Re-query CCDS DB by GeneID:79670See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35057.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375963.8 ENSP00000365130.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375963.8Link to Ensembl Protein Viewer:ENSP00000365130.3Re-query CCDS DB by Nucleotide ID:ENST00000375963Re-query CCDS DB by Protein ID:ENSP00000365130
Original member Current member NCBI NM_001185059.2 NP_001171988.1 Accepted alive Link to Nucleotide Sequence:NM_001185059.2Link to Protein Sequence:NP_001171988.1Re-query CCDS DB by Nucleotide ID:NM_001185059Re-query CCDS DB by Protein ID:NP_001171988Link to BLAST:NP_001171988.1
Original member Current member NCBI NM_024617.4 NP_078893.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024617.4Link to Protein Sequence:NP_078893.2Re-query CCDS DB by Nucleotide ID:NM_024617Re-query CCDS DB by Protein ID:NP_078893Link to BLAST:NP_078893.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171988.1 1495 Q5VYS8-1 1495 100% 0 0
NP_078893.2 1495 Q5VYS8-1 1495 100% 0 0

Chromosomal Locations for CCDS 35057.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 86288677 86288744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86301276 86301601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86303086 86303201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86304856 86304947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86305192 86305239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86308429 86308606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86309212 86309289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86309463 86309576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86309928 86310017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86310706 86310809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86317219 86317276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86318958 86319058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86319584 86319670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86322325 86322475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86322873 86323960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86325334 86325514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86328340 86328492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86337419 86337538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86338823 86338949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86340036 86340105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86341002 86341053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86343075 86343163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86344977 86345154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86345669 86345785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86346299 86346480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 86352680 86353199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4488 nt):
ATGGGAGATACAGCAAAACCTTATTTCGTGAAGCGCACTAAAGACCGGGGGACTATGGATGATGATGACT
TCAGAAGGGGTCACCCCCAACAAGATTATTTAATAATAGATGACCATGCTAAAGGCCATGGCAGTAAAAT
GGAAAAGGGCCTTCAAAAAAAGAAGATAACACCAGGGAACTATGGGAATACCCCCAGAAAAGGACCATGT
GCTGTTTCCAGCAATCCATATGCATTTAAAAACCCAATCTACAGTCAACCCGCTTGGATGAATGACAGCC
ACAAAGATCAGAGTAAGAGATGGCTGTCTGATGAACATACTGGTAATTCAGACAACTGGAGAGAATTCAA
ACCTGGACCTAGAATTCCTGTTATAAACCGACAAAGAAAAGACTCCTTTCAAGAAAATGAAGATGGTTAT
AGGTGGCAAGACACAAGAGGCTGCAGAACTGTAAGACGACTGTTTCATAAAGACCTAACAAGCCTAGAAA
CCACGTCAGAAATGGAAGCAGGAAGTCCTGAAAACAAGAAGCAGAGGTCCAGACCTAGGAAGCCACGGAA
GACTAGAAATGAGGAAAATGAGCAGGATGGAGACTTGGAAGGCCCTGTGATCGATGAGTCTGTACTTTCA
ACGAAGGAGCTGCTAGGCTTACAGCAGGCTGAGGAGAGACTGAAGAGAGACTGCATTGACAGGCTAAAAA
GGCGACCACGAAACTACCCTACAGCAAAGTACACCTGCAGACTCTGTGATGTTTTAATTGAATCCATTGC
ATTTGCCCATAAGCATATCAAGGAAAAGAGGCACAAGAAAAACATTAAGGAGAAGCAAGAGGAAGAGTTG
CTCACTACGTTACCCCCACCAACACCCTCCCAGATAAATGCAGTTGGCATTGCCATTGACAAAGTGGTAC
AGGAATTTGGCTTACACAATGAGAACTTGGAACAGAGGCTGGAAATTAAACGTATCATGGAAAATGTGTT
CCAACACAAGTTACCAGATTGTTCCCTAAGATTATATGGGTCATCCTGTAGCAGATTGGGTTTCAAAAAT
TCGGATGTAAACATTGACATCCAGTTTCCAGCCATTATGTCTCAGCCAGATGTCCTCTTACTTGTTCAAG
AATGTTTAAAGAACAGTGACTCCTTTATTGATGTTGATGCAGACTTCCATGCTAGGGTGCCAGTGGTGGT
GTGCAGAGAAAAGCAAAGTGGTCTTCTGTGTAAAGTGAGCGCAGGAAATGAAAATGCTTGTCTGACAACA
AAGCATTTAACTGCCCTTGGAAAACTAGAACCAAAGCTGGTTCCTTTGGTGATTGCATTTAGGTACTGGG
CAAAGCTTTGCAGTATAGATCGCCCTGAAGAAGGAGGTCTGCCACCTTATGTGTTTGCCCTGATGGCCAT
TTTCTTTCTTCAGCAGAGGAAAGAACCCCTTTTGCCTGTATATCTAGGATCATGGATTGAAGGATTCTCA
TTAAGCAAACTAGGGAATTTCAACCTTCAAGACATTGAAAAAGATGTTGTGATCTGGGAACATACTGACA
GTGCTGCAGGGGACACAGGCATAACAAAAGAAGAGGCACCAAGAGAAACGCCGATTAAAAGGGGACAGGT
GTCATTAATATTGGATGTGAAACACCAGCCTTCAGTACCAGTTGGGCAGCTCTGGGTGGAATTGCTGCGG
TTCTATGCTTTAGAATTTAATTTGGCTGATTTAGTGATAAGTATTCGTGTCAAAGAATTGGTATCTCGGG
AATTGAAGGATTGGCCCAAAAAGCGCATTGCCATTGAAGATCCCTACTCTGTTAAAAGAAATGTGGCAAG
AACCCTAAATAGTCAACCTGTGTTTGAATATATACTTCATTGTTTAAGGACAACATACAAGTATTTTGCT
CTTCCACACAAAATTACAAAATCCAGCCTTCTAAAGCCTCTGAATGCAATTACATGTATTTCAGAACATT
CTAAAGAAGTAATAAATCATCATCCAGATGTACAAACAAAAGATGATAAGCTCAAAAACTCAGTTTTGGC
CCAAGGTCCTGGTGCTACCAGTTCAGCTGCAAATACCTGTAAGGTACAGCCACTTACTCTTAAAGAGACT
GCTGAAAGTTTTGGAAGCCCACCAAAAGAAGAAATGGGAAATGAACACATCAGTGTCCACCCTGAAAACT
CAGACTGTATCCAAGCAGATGTTAACTCTGATGATTACAAGGGTGATAAAGTATACCATCCAGAAACAGG
AAGGAAAAACGAGAAAGAGAAAGTTGGAAGGAAGGGCAAGCATCTGTTGACTGTTGATCAGAAACGTGGA
GAGCATGTTGTCTGTGGCAGCACACGTAATAATGAGTCAGAGAGCACTTTGGATTTAGAAGGCTTCCAAA
ATCCCACAGCTAAAGAGTGTGAGGGACTTGCCACTTTAGATAACAAGGCTGATCTTGATGGAGAAAGTAC
AGAAGGTACTGAGGAACTAGAAGACTCTCTAAACCACTTTACCCACTCAGTACAGGGCCAGACATCAGAA
ATGATTCCCTCTGATGAAGAGGAGGAGGACGACGAAGAAGAGGAGGAGGAAGAAGAACCTAGGCTCACCA
TTAACCAAAGGGAAGATGAAGATGGCATGGCTAATGAAGATGAGTTAGACAACACCTACACTGGGTCAGG
GGATGAGGACGCCCTATCTGAAGAGGATGATGAGTTAGGCGAAGCTGCTAAGTATGAAGACGTGAAAGAA
TGTGGAAAACATGTAGAAAGAGCTCTCCTAGTGGAACTTAATAAAATAAGTCTCAAGGAAGAAAATGTAT
GTGAAGAAAAAAATTCACCTGTGGATCAGTCTGATTTTTTTTATGAATTCAGTAAACTTATCTTCACCAA
AGGCAAGTCTCCTACGGTAGTGTGCAGCTTATGCAAACGAGAGGGTCATCTAAAGAAGGACTGTCCTGAA
GACTTCAAAAGAATCCAGCTAGAACCTCTGCCACCATTAACACCCAAGTTTTTAAATATCTTAGATCAAG
TCTGTATCCAGTGTTATAAGGATTTTTCTCCAACAATTATAGAAGATCAGGCTCGTGAACATATTCGGCA
AAACCTAGAAAGTTTCATAAGACAGGACTTTCCAGGAACTAAATTGAGCCTGTTTGGCTCCTCCAAAAAT
GGATTTGGGTTCAAACAGAGTGACCTTGACGTCTGTATGACAATTAATGGACTTGAAACTGCTGAGGGAT
TGGACTGTGTCAGAACTATTGAAGAATTAGCAAGAGTCCTCAGAAAACATTCAGGTCTGAGAAACATCTT
ACCTATTACAACAGCAAAGGTGCCAATTGTGAAGTTCTTCCATTTGAGAAGTGGTCTGGAAGTAGATATC
AGTTTGTATAACACATTGGCCCTTCATAACACAAGGCTTTTATCTGCTTATTCCGCCATTGATCCCAGAG
TGAAGTATTTGTGCTATACCATGAAAGTATTTACAAAGATGTGTGATATTGGTGATGCATCTAGAGGCAG
CTTATCATCGTATGCATATACTCTTATGGTGCTATATTTTCTCCAGCAGAGGAATCCACCAGTCATTCCT
GTCCTTCAAGAGATATACAAAGGTGAAAAGAAACCTGAAATATTTGTTGATGGCTGGAATATTTATTTTT
TTGATCAAATAGATGAACTGCCTACCTATTGGTCAGAATGTGGAAAAAATACAGAATCTGTTGGGCAGTT
ATGGTTGGGCCTTCTTCGTTTCTACACAGAGGAATTTGATTTTAAAGAACATGTTATTAGCATCAGGAGA
AAAAGTCTGCTTACAACTTTTAAGAAACAGTGGACCTCAAAATACATTGTTATTGAAGATCCCTTTGATT
TGAATCATAATCTTGGAGCTGGATTATCAAGGAAAATGACAAATTTTATAATGAAGGCTTTTATCAATGG
TAGAAGAGTATTTGGTATTCCTGTCAAGGGATTTCCAAAGGACTACCCCTCAAAAATGGAATACTTTTTT
GATCCAGATGTGTTAACTGAAGGAGAGCTGGCCCCAAATGATAGATGTTGTCGAATTTGTGGAAAAATCG
GACACTTCATGAAGGACTGTCCTATGAGGAGAAAAGTAAGACGGCGGCGAGATCAGGAAGATGCCCTGAA
CCAAAGATACCCTGAGAACAAGGAAAAAAGAAGCAAAGAGGACAAAGAAATTCACAACAAGTACACAGAA
AGGGAGGTGTCAACAAAAGAAGATAAGCCCATACAGTGCACACCTCAGAAAGCCAAGCCAATGCGGGCAG
CTGCTGACCTGGGGAGGGAGAAGATCCTCAGGCCACCAGTAGAAAAATGGAAGAGACAGGATGACAAAGA
CTTAAGAGAAAAACGTTGTTTTATTTGTGGAAGAGAAGGGCACATTAAAAAGGAATGCCCACAGTTTAAA
GGCTCTTCAGGTAGCCTTTCCAGTAAATATATGACTCAGGGAAAAGCCTCAGCGAAGAGGACCCAGCAGG
AATCATGA

Translation (1495 aa):
MGDTAKPYFVKRTKDRGTMDDDDFRRGHPQQDYLIIDDHAKGHGSKMEKGLQKKKITPGNYGNTPRKGPC
AVSSNPYAFKNPIYSQPAWMNDSHKDQSKRWLSDEHTGNSDNWREFKPGPRIPVINRQRKDSFQENEDGY
RWQDTRGCRTVRRLFHKDLTSLETTSEMEAGSPENKKQRSRPRKPRKTRNEENEQDGDLEGPVIDESVLS
TKELLGLQQAEERLKRDCIDRLKRRPRNYPTAKYTCRLCDVLIESIAFAHKHIKEKRHKKNIKEKQEEEL
LTTLPPPTPSQINAVGIAIDKVVQEFGLHNENLEQRLEIKRIMENVFQHKLPDCSLRLYGSSCSRLGFKN
SDVNIDIQFPAIMSQPDVLLLVQECLKNSDSFIDVDADFHARVPVVVCREKQSGLLCKVSAGNENACLTT
KHLTALGKLEPKLVPLVIAFRYWAKLCSIDRPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLGSWIEGFS
LSKLGNFNLQDIEKDVVIWEHTDSAAGDTGITKEEAPRETPIKRGQVSLILDVKHQPSVPVGQLWVELLR
FYALEFNLADLVISIRVKELVSRELKDWPKKRIAIEDPYSVKRNVARTLNSQPVFEYILHCLRTTYKYFA
LPHKITKSSLLKPLNAITCISEHSKEVINHHPDVQTKDDKLKNSVLAQGPGATSSAANTCKVQPLTLKET
AESFGSPPKEEMGNEHISVHPENSDCIQADVNSDDYKGDKVYHPETGRKNEKEKVGRKGKHLLTVDQKRG
EHVVCGSTRNNESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTEELEDSLNHFTHSVQGQTSE
MIPSDEEEEDDEEEEEEEEPRLTINQREDEDGMANEDELDNTYTGSGDEDALSEEDDELGEAAKYEDVKE
CGKHVERALLVELNKISLKEENVCEEKNSPVDQSDFFYEFSKLIFTKGKSPTVVCSLCKREGHLKKDCPE
DFKRIQLEPLPPLTPKFLNILDQVCIQCYKDFSPTIIEDQAREHIRQNLESFIRQDFPGTKLSLFGSSKN
GFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLRKHSGLRNILPITTAKVPIVKFFHLRSGLEVDI
SLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIP
VLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRR
KSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDYPSKMEYFF
DPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTE
REVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKECPQFK
GSSGSLSSKYMTQGKASAKRTQQES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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