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Report for CCDS35101.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35101.1 Public Homo sapiens 9 PALM2AKAP2 24 110 108 CCDS HistoryNCBI Gene:445815Re-query CCDS DB by CCDS ID:35101.1Re-query CCDS DB by GeneID:445815See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 35101.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302798.7 ENSP00000305861.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000302798.7Link to Ensembl Protein Viewer:ENSP00000305861.7Re-query CCDS DB by Nucleotide ID:ENST00000302798Re-query CCDS DB by Protein ID:ENSP00000305861
Original member Current member NCBI NM_147150.3 NP_671492.1 Accepted alive Link to Nucleotide Sequence:NM_147150.3Link to Protein Sequence:NP_671492.1Re-query CCDS DB by Nucleotide ID:NM_147150Re-query CCDS DB by Protein ID:NP_671492Link to BLAST:NP_671492.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_671492.1 1090 Q9Y2D5-6 1090 100% 0 0

Chromosomal Locations for CCDS 35101.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 109780489 109780533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109867491 109867571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109880551 109880681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109923735 109923849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109925061 109925082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109931927 109932028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110015954 110016039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110136127 110138539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110156319 110156497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110168399 110168497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3273 nt):
ATGGCAGAGGCGGAATTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAAAAGAAAGAGGCAGACTGAAA
TA
GAAGGCAAGCGACAACAGCTTGACGAGCAGATACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTCG
G
GAGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTGCCGAAGAGGAGGAAGCCAGGAGGCGGCAGTCT
GAA
GAGGATGAGTTCAGAGTCAAGCAACTTGAAGATAACATTCAGAGGCTGGAGCAAGAAATACAAACGC
TA
GAAAGTGAAGAGTCCCAGATATCTGCCAAAGAGCAAATCATCCTAGAGAAACTGAAGGAAACAGAAAA
A
TCCTTCAAGGACTTTCAGAAGGGTTTCTCCAGTACGGATGGAGATGCAGTAAATTACATTTCCTCCCAG
CTT
CCCGACCTGCCAATCCTCTGTTCACGAACAGCAGAACCATCACCTGGGCAGGACGGGACCAGCAGAG
CG
GCTGGAGTCGGGTGGGAGAATGTGCTGCTAAAGGAAGGTGAGTCAGCCTCGAACGCCACAGAAACATC
C
GGCCCAGACATGACTATCAAGAAGCCTCCCCAGCTTTCTGAGGATGATATCTGGCTAAAAAGCGAGGGA
GAC
AACTATAGTGCCACCCTCCTGGAGCCTGCTGCCAGCTCTCTTTCCCCAGATCACAAAAACATGGAAA
TT
GAGGTGTCTGTTGCAGAATGTAAAAGTGTTCCTGGAATCACCTCTACCCCACATCCCATGGACCATCC
C
TCCGCTTTCTATTCACCCCCGCATAATGGCCTCCTTACTGATCACCACGAATCCCTGGATAATGATGTT
GCC
AGAGAGATCCGCTATCTAGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTGCTGTGGATGGAACGT
AC
AATGGAACATCCTCCCCAGAGCCTGGTGCAGTGGTTCTGGTGGGCGGCCTAAGCCCCCCTGTCCACGA
G
GCGACCCAGCCAGAACCCACTGAAAGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAAT
AGC
AGCCCTGACCCCATGGCAGAGGCAGAAAGAACAAATGGCCATTCCCCCAGCCAGCCTAGAGATGCGC
TG
GGGGACAGCCTGCAGGTGCCTGTCAGCCCCAGCTCCACAACCAGCTCACGGTGTTCTTCCCGAGATGG
A
GAGTTCACTCTCACCACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAG
CCC
TCCAAGCTCTTTGAGGATGACGAGCATGAGAAAGAACAATACTGCATTAGAAAAGTGAGGCCTTCAG
AG
GAGATGCTGGAGCTGGAAAAGGAGAGGAGAGAGCTCATCCGCAGCCAGGCCGTCAAGAAGAATCCTGG
C
ATTGCAGCAAAATGGTGGAATCCCCCGCAGGAAAAAACCATCGAGGAGCAGCTGGACGAGGAACATCTG
GAG
TCGCACAAAAAGTACAAGGAGCGCAAAGAGAGAAGGGCACAGCAGGAACAGTTGCTGCTGCAGAAGC
AG
TTACAGCAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACAGCCCCTGCCTCTTCTCATGAACGCGC
A
AGCATGATTGACAAAGCAAAGGAGGACATTGTCACAGAGCAGATAGATTTCTCTGCTGCTCGCAAACAA
TTT
CAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACACCCAGGCTGTTCTCCATCA
AG
CCTTTCTACAGGCCTCTGGGGTCAGTCAACTCAGACAAGCCACTGACTAATCCGAGACCACCTTCTGT
C
GGGGGACCTCCAGAAGACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCCCCGGTGCCCTGGAGACC
CCA
TCGGCAGCAGGAAGCCAGGGCAACACAGCCTCTCAGGGGAAGGAAGGGCCCTACAGCGAGCCTTCTA
AA
CGTGGGCCCTTATCTAAACTGTGGGCTGAGGATGGAGAATTTACGAGCGCCCGGGCTGTCCTCACTGT
G
GTCAAGGATGATGACCATGGGATTTTGGATCAGTTCTCAAGATCTGTCAATGTCTCCTTGACCCAAGAG
GAG
CTTGACTCTGGTCTGGACGAATTGTCGGTGAGGTCTCAGGATACCACAGTCCTGGAGACCCTATCCA
AT
GATTTCAGCATGGACAACATCAGTGACAGCGGGGCATCCAATGAGACAACCAATGCCCTCCAGGAAAA
T
TCACTGGCTGATTTTTCTCTGCCCCAGACACCACAAACTGACAACCCCTCAGAGGGCCGAGGAGAAGGC
GTC
TCCAAGTCATTTAGTGATCATGGTTTCTATTCCCCTTCCTCCACGCTGGGGGACTCTCCGTTGGTTG
AT
GACCCCTTGGAGTATCAGGCTGGCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAGGT
G
GATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGACTGTAGAGGAA
GCT
GAAGCTGCGGCTTTCGGCTCAGAAAAGCCTCAGAGCATGTTTGAGCCACCTCAGGTGTCTTCTCCTG
TT
CAAGAGAAAAGGGATGTATTACCAAAGATTCTGCCTGCTGAAGACAGGGCGCTCAGGGAAAGGGGGCC
C
CCCCAGCCACTGCCAGCTGTGCAGCCCAGTGGCCCGATTAACATGGAGGAGACCAGGCCCGAAGGAAGC
TAT
TTCAGCAAGTACTCGGAGGCAGCTGAGCTGAGAAGCACAGCCTCCCTCCTGGCCACTCAAGAATCTG
AC
GTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGAAACAGCGGACTTTGTCCATGATTGAGGAAGAGAT
C
CGAGCAGCTCAGGAAAGGGAAGAGGAGCTGAAGAGGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCCC
AGG
ACAAAGAATGCCCCATCACTGCCCTCCAGAACATGCTACAAAACTGCTCCAGGGAAAATAGAGAAAG
TC
AAACCTCCTCCATCCCCCACCACTGAAGGCCCCAGCTTGCAGCCTGACTTAGCCCCTGAAGAGGCTGC
C
GGAACCCAGCGGCCCAAGAATCTGATGCAGACCCTCATGGAAGACTATGAGACACACAAATCTAAAAGG
CGC
GAGAGAATGGATGATAGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTT
TG
CGCTGGGAAGCAGGGATCTATGCCAACCAGGAGGAAGAAGACAACGAATAA


Translation (1090 aa):
MAEAELHKERLQAIAEKRKRQTEIEGKRQQLDEQILLLQHSKSKVLREKWLLQGIPAGTAEEEEARRRQS
E
EDEFRVKQLEDNIQ
RLEQEIQTLESEESQISAKEQIILEKLKETEKSFKDFQKGFSSTDGDAVNYISSQ
L
PDLPILCSRTAEPSPGQDGTSRAA
GVGWENVLLKEGESASNATETSGPDMTIKKPPQLSEDDIWLKSEG
D
NYSATLLEPAASSLSPDHKNMEIEVSVAECKSVPGITSTPHPMDHPSAFYSPPHNGLLTDHHESLDNDV
A
REIRYLDEVLEANCCDSAVDGTYNGTSSPEPGAVVLVGGLSPPVHEATQPEPTERTASRQAPPHIELSN
S
SPDPMAEAERTNGHSPSQPRDALGDSLQVPVSPSSTTSSRCSSRDGEFTLTTLKKEAKFELRAFHEDKK
P
SKLFEDDEHEKEQYCIRKVRPSEEMLELEKERRELIRSQAVKKNPGIAAKWWNPPQEKTIEEQLDEEHL
E
SHKKYKERKERRAQQEQLLLQKQLQQQQQQPPSQLCTAPASSHERASMIDKAKEDIVTEQIDFSAARKQ
F
QLMENSRQAVAKGQSTPRLFSIKPFYRPLGSVNSDKPLTNPRPPSVGGPPEDSGASAAKGQKSPGALET
P
SAAGSQGNTASQGKEGPYSEPSKRGPLSKLWAEDGEFTSARAVLTVVKDDDHGILDQFSRSVNVSLTQE
E
LDSGLDELSVRSQDTTVLETLSNDFSMDNISDSGASNETTNALQENSLADFSLPQTPQTDNPSEGRGEG
V
SKSFSDHGFYSPSSTLGDSPLVDDPLEYQAGLLVQNAIQQAIAEQVDKAVSKTSRDGAEQQGPEATVEE
A
EAAAFGSEKPQSMFEPPQVSSPVQEKRDVLPKILPAEDRALRERGPPQPLPAVQPSGPINMEETRPEGS
Y
FSKYSEAAELRSTASLLATQESDVMVGPFKLRSRKQRTLSMIEEEIRAAQEREEELKRQRQVLQSTQSP
R
TKNAPSLPSRTCYKTAP
GKIEKVKPPPSPTTEGPSLQPDLAPEEAAGTQRPKNLMQTLMEDYETHKSKR
R
ERMDDSS
VLEATRVNRRKSALALRWEAGIYANQEEEDNE



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser