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Report for CCDS35857.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35857.1 Public Mus musculus 10 Map3k5 23 108 98 CCDS HistoryNCBI Gene:26408Re-query CCDS DB by CCDS ID:35857.1Re-query CCDS DB by GeneID:26408See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35857.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095806.9 ENSMUSP00000093485.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095806.9Link to Ensembl Protein Viewer:ENSMUSP00000093485.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000095806Re-query CCDS DB by Protein ID:ENSMUSP00000093485
Original member Current member NCBI NM_008580.4 NP_032606.4 Accepted alive Link to Nucleotide Sequence:NM_008580.4Link to Protein Sequence:NP_032606.4Re-query CCDS DB by Nucleotide ID:NM_008580Re-query CCDS DB by Protein ID:NP_032606Link to BLAST:NP_032606.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032606.4 1380 O35099 1380 100% 0 0

Chromosomal Locations for CCDS 35857.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 19934606 19935074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20000566 20000705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20019558 20019581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20023608 20023801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20024885 20025053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20026181 20026287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20029033 20029203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20046372 20046484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20056475 20056634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20058937 20059090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20067829 20067936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20076482 20076531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20079242 20079337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20082387 20082468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20094362 20094495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20099505 20099632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20100061 20100197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20104160 20104265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20108149 20108306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20110718 20110895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20111778 20111798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20118145 20118322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20118415 20118583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20124952 20125137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20127652 20127757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20131965 20132208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20136894 20137006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20138263 20138375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20140649 20140725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 20141523 20141580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4143 nt):
ATGGGCACCGAAGCCGGCGAGGGCATCACTTTCTCCGTGCCGCCCTTTGCGTCCGTGGGCTTTTGCACCA
TCCCGGAGGGCGGCAGCTGCCGGAGGGGAGGAGGAGCGGCGACGGCGGCGGAGGGAGAGCCGAGCCTGCA
GCCCTTGCTTGTGCCGCCGCCGCCGCCACCGCCGGGCAGTTTCTGGAACGTGGAGAGCGCGGCGGCTCCC
GGCACCAGCTGCCCTACCACCGCCCCCGGGAGCAGCGCCACCCGAGGCCGGGGCAACTCTGGCAGCGGGG
GCGGCCGGCGTACCACCGTGGCTTATGTGATCAATGAGGCGAGCCAGGGGCAGCTGGTGGTGGCGGAGAG
CGAGGCCCTGCAGAGCCTGCGGGAGGCGTGCGAGGCGGTGGGCGCCACCCTGGAGACCCTGCATTTCGGG
AAGCTGGACTTCGGGGAAACCGCCGTGCTGGACCGTTTTTACAACGCAGATATTGCTGTGGTGGAGATGA
GCGACGCCTTCCGGCAGCCTTCCTTGTTTTACCATCTTGGAGTGCGAGAAAGCTTCAGTATGGCCAACAA
CATCATCCTCTACTGCGATACTAATTCCGATTCACTCCAGTCCCTGAAGGAAATTATTTGCCAGAAGAAT
ACTGTGTGCACCGGGAACTACACCTTCATCCCCTACATGGTGACACCACACAACAAGGTCTACTGCTGTG
ACAGCAGCTTCATGAAGGGCCTGACTGAGCTCATGCAGCCTAACTTCGAGCTCCTGCTGGGGCCCATCTG
CTTACCCCTCGTGGACCGTTTCGTTCAGCTTTTGAAGGTGGCGCAAGCGAGTTCCAGCCAGTACTTCCGG
GAATCCATACTCAGCGATATCAGGAAAGCACGGAACCTGTACACTGGTAAAGAATTGGCAGCTGAATTGG
CGAGGATCCGGCAACGGGTAGACAATATTGAAGTTTTGACAGCAGACATTGTTATCAACCTGTTGCTTTC
CTACAGAGACATCCAGGACTATGACTCCATAGTGAAGCTGGTAGAGACGTTAGAAAAACTTCCAACCTTC
GACTTGGCCTCGCACCACCACGTGAAGTTTCATTACGCATTTGCACTGAACAGGAGAAATCTCCCTGGAG
ACAGAGCAAAAGCTCTTGACATCATGATCCCCATGGTACAAAGTGAAGAGCAAGTTGCTTCGGATATGTA
TTGTCTCGTTGGCCGAATCTACAAAGATATGTTTTTGGATTCAAATTTCACTGACACGGAAAGCAGGGAC
CATGGAGCATCTTGGTTCAAAAAGGCATTTGAGTCTGAGCCAACACTACAGTCAGGAATTAATTATGCAG
TTCTCTTGCTGGCGGCTGGGCACCAGTTTGAATCTTCTTTTGAGCTTCGGAAAGTTGGAGTGAAGCTGAG
TAGCCTTCTGGGTAAAAAGGGGAACTTGGAAAAACTCCAGAGCTACTGGGAAGTCGGATTTTTTCTGGGA
GCCAGTGTCCTGGCCAACGACCACCTCAGGGTCATTCAGGCATCCGAGAAGCTGTTCAGACTGAAGACAC
CAGCGTGGTACCTCAAGTCTATCGTGGAGACCATTCTGATATATAAACACTTTGTGAAACTGACCACAGA
GCAGCCCTCGGCTAAGCAGGAACTCGTGGACTTCTGGATGGATTTCCTGGTCGAGGCCACAAAAACAGAT
GTTACTGTTGTCAGGTTCCCAGTATTAATATTAGAGCCAACCAAAATCTATCAGCCTTCTTACCTGTCTA
TCAATAATGAAGTTGAGGAGAAGACAATATCTATTTGGCATGTTCTCCCTGATGACAAGAAAGGTATACA
CGAGTGGAACTTCGGTGCTTCCTCTGTCAGGGGAGTGAGCATCTCTAAGTTTGAAGAACGATGCTGTTTC
CTTTATGTGCTTCACAATTCTGATGACTTCCAAATCTACTTCTGCACAGAACTTCACTGTAAAAGGTTTT
TTGAAATGGTGAATACCATCACGGAAGAGAAGGGGAGAGGCGCGGAGGACGGAGACTGTGAGGGTGACTC
CCTGGAGTATGACTACGAATACGATGAAAATGGAGACAGAGTTGTGTTAGGGAAGGGCACTTATGGGATC
GTCTATGCAGGACGAGACCTGAGCAACCAGGTCAGAATTGCTATTAAGGAAATCCCAGAGAGAGACAGCA
GATACTCTCAGCCCCTGCATGAAGAAATCGCCCTGCACAAGCATCTGAAACACAAAAACATTGTCCAGTA
TCTGGGCTCCTTCAGTGAGAACGGCTTCATCAAAATCTTCATGGAGCAAGTCCCAGGAGGAAGCCTCTCT
GCTCTCCTTCGTTCAAAATGGGGCCCATTAAAGGACAACGAACAGACGATTGGCTTCTATACGAAGCAGA
TACTGGAAGGATTAAAATACCTTCACGACAATCAGATAGTCCACCGGGATATAAAGGGTGACAATGTATT
GATTAATACCTACAGTGGTGTGCTCAAGATCTCTGACTTCGGGACATCCAAGAGGCTTGCTGGCATAAAC
CCATGTACCGAAACCTTTACAGGTACCCTTCAGTATATGGCGCCAGAAATAATCGATAAAGGACCACGAG
GCTATGGAAAGGCCGCCGACATTTGGTCACTGGGCTGCACAATCATCGAAATGGCTACTGGAAAACCACC
ATTTTATGAACTAGGAGAGCCACAGGCAGCCATGTTCAAGGTGGGGATGTTTAAGGTCCACCCGGAGATC
CCAGAGTCCATGTCGGCGGAGGCCAAGGCGTTCATACTGAAGTGTTTTGAACCAGACCCTGACAAGAGAG
CCTGTGCTAATGACTTGCTTATTGATGAGTTCTTAAAAGTGTCCAGCAAAAAGAAAAAGACACAACCCAA
ACTTTCAGCTCTCTCGACTGGATCGAATGAGTATCTTAGAAGCATCTCCCTGCCGGTCCCTGTCCTGGTA
GAAGACACCAGCAGCAGTAGCGAGTATGGCTCTGTTTCTCCTGATACAGAGCTGAAGGCGGACCCCTTCT
CCTTCAAAGCCAGAGCTAAGTCCTGTGGAGAAAAGGACGGGAAAGGGATACGGACATTGTTCCTGGGCAT
TCCAGATGAAAATTTTGAAGATCACAGTGCGCCCCCATCTCCTGAAGAGAAAGACTCGGGCTTTTTTATG
CTGAGAAAGGATAGTGAGAGGCGAGCTACCCTTCACAGAATCCTGACCGAAGACCAGGACAAGGTTGTAA
GGAACCTAATGGAATCTCTGGCCCAGGGTGCTGAAGAGCCTAAACTAAAGTGGGAACACATCACAACCCT
CATCTCGAGCCTCAGAGAGTTTGTGAGGTCCACTGACCGAAAAATCATAGCCACTACACTGTCCAAGCTC
AAGCTGGAGCTGGACTTCGACAGCCACGGCATCAGCCAGGTGCAGGTGGTCCTCTTTGGCTTCCAGGATG
CGGTCAATAAAGTTCTTCGGAATCATAACATCAAGCCACACTGGATGTTTGCCCTGGACAGCATCATCCG
AAAGGCTGTGCAGACTGCAATTACCATTCTGGTTCCAGAGTTGAGGCCACATTTTAGCCTTGCATCAGAG
AGCGACACAGCTGATCCGGAAGACCTGGATGTCGAAGATGAACACGAGGAATTGTCTTCAAATCAGACAG
TCCGACGGCCTCAGGCCATCACTGAGGACGCTGTGGCTACCTCGGGGGTGAGCACGCTAAGCTCCACTGT
GTCCCATGACTCCCAGAATGCACACCGGTCGCTGAACGTGCAGCTTGGAAGGATGAAGATTGAAACTAAT
AGGTTACTTGAAGAGCTGGTTCGGAAAGAGAGAGAGTTACAGGCACTCCTCCATCAAGCCATTGAGGAAA
AAGACCAAGAAATTAGGCACCTGAAGCTCAAGTCCCAGCCCATAGATATCCCTGGGTTTCCTGTGTGCCA
CCTGAACTCTCCTGGCACGACCACGGAAGATTCTGAACTTCCTGGCTGGCTGAGAGAAAATGGAGCTGAT
GAAGACACTATAAGTCGGTTTCTGGCTGAGGATTACACGCTAGTGGATGTTCTTTACTACGTCACACGTG
ATGATCTGAAGTGCCTCAGACTAAGGGGCGGGATGCTGTGCACGCTGTGGAAGGCCATCATTGACTTTCG
GAACAAATGCTGA

Translation (1380 aa):
MGTEAGEGITFSVPPFASVGFCTIPEGGSCRRGGGAATAAEGEPSLQPLLVPPPPPPPGSFWNVESAAAP
GTSCPTTAPGSSATRGRGNSGSGGGRRTTVAYVINEASQGQLVVAESEALQSLREACEAVGATLETLHFG
KLDFGETAVLDRFYNADIAVVEMSDAFRQPSLFYHLGVRESFSMANNIILYCDTNSDSLQSLKEIICQKN
TVCTGNYTFIPYMVTPHNKVYCCDSSFMKGLTELMQPNFELLLGPICLPLVDRFVQLLKVAQASSSQYFR
ESILSDIRKARNLYTGKELAAELARIRQRVDNIEVLTADIVINLLLSYRDIQDYDSIVKLVETLEKLPTF
DLASHHHVKFHYAFALNRRNLPGDRAKALDIMIPMVQSEEQVASDMYCLVGRIYKDMFLDSNFTDTESRD
HGASWFKKAFESEPTLQSGINYAVLLLAAGHQFESSFELRKVGVKLSSLLGKKGNLEKLQSYWEVGFFLG
ASVLANDHLRVIQASEKLFRLKTPAWYLKSIVETILIYKHFVKLTTEQPSAKQELVDFWMDFLVEATKTD
VTVVRFPVLILEPTKIYQPSYLSINNEVEEKTISIWHVLPDDKKGIHEWNFGASSVRGVSISKFEERCCF
LYVLHNSDDFQIYFCTELHCKRFFEMVNTITEEKGRGAEDGDCEGDSLEYDYEYDENGDRVVLGKGTYGI
VYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS
ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN
PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI
PESMSAEAKAFILKCFEPDPDKRACANDLLIDEFLKVSSKKKKTQPKLSALSTGSNEYLRSISLPVPVLV
EDTSSSSEYGSVSPDTELKADPFSFKARAKSCGEKDGKGIRTLFLGIPDENFEDHSAPPSPEEKDSGFFM
LRKDSERRATLHRILTEDQDKVVRNLMESLAQGAEEPKLKWEHITTLISSLREFVRSTDRKIIATTLSKL
KLELDFDSHGISQVQVVLFGFQDAVNKVLRNHNIKPHWMFALDSIIRKAVQTAITILVPELRPHFSLASE
SDTADPEDLDVEDEHEELSSNQTVRRPQAITEDAVATSGVSTLSSTVSHDSQNAHRSLNVQLGRMKIETN
RLLEELVRKERELQALLHQAIEEKDQEIRHLKLKSQPIDIPGFPVCHLNSPGTTTEDSELPGWLRENGAD
EDTISRFLAEDYTLVDVLYYVTRDDLKCLRLRGGMLCTLWKAIIDFRNKC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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