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Report for CCDS36281.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36281.1 Public Mus musculus 11 Kif2b 23 108 98 CCDS HistoryNCBI Gene:73470Re-query CCDS DB by CCDS ID:36281.1Re-query CCDS DB by GeneID:73470See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36281.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061019.5 ENSMUSP00000058084.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061019.5Link to Ensembl Protein Viewer:ENSMUSP00000058084.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000061019Re-query CCDS DB by Protein ID:ENSMUSP00000058084
Original member Current member NCBI NM_028547.3 NP_082823.1 Accepted alive Link to Nucleotide Sequence:NM_028547.3Link to Protein Sequence:NP_082823.1Re-query CCDS DB by Nucleotide ID:NM_028547Re-query CCDS DB by Protein ID:NP_082823Link to BLAST:NP_082823.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082823.1 668 Q8C0N1 668 100% 0 0

Chromosomal Locations for CCDS 36281.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 91575449 91577455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2007 nt):
ATGGCCAGCCAGTTCTGCCTTCCTCTGGCCCCACGCCTCTCACCCCTTAAACCTCTGAAATCCCACTTCA
CA
GACTTCCAGGTTGGCATCTGTGTGGCAATCCAGCGCAGTGACAAACGGATTCACCTGGCTGTGGTCAC
A
GAGATCAACAGAGAAAACTCCTGGGTCACAGTAGAGTGGGTTGAGAAAGGAGTCAAAAAAGGAAAGAAG
ATC
GAACTGGAGACTGTACTTCTGTTGAATCCGGCTCTGGCCTCTCTTGAACACCAACGGTCACGTAGGC
CC
CTGCGCCCAGTGTCTGTAGTACCATCTACTGCCATTGGAGACCAGCGTACAGCCACCAAGTGGATTGC
G
ATGATCCCACACAGAAATGAAACACCCTCAGGGGACAGCCAAACCCTGATGATCCCCAGCAACCCTTGT
CTG
ATGAAGCGGAAAAAATCCCCCTGCCTACGGGAAATTGAAAAGCTGCAGAAGCAGAGAGAGAAGCGCC
GC
CGACTGCAGCTAGAGATCCGAGCTAGACGAGCCCTTGACATCAACACTGGAAATCCGAACTTCGAGAC
T
ATGCGCATGATTGAGGAGTATCGCAGGCGTCTAGATAGCAGCAAGATGTCCAGCCTGGAGCCCCCAGAA
GAC
CACCGGATCTGTGTGTGTGTGAGAAAGCGCCCTCTTAATCAGAGAGAGACGACGATGAAGGACCTCG
AT
ATCATCACTATTCCCTCGCACAATGTAGTCATGGTCCACGAGTCTAAACAAAAGGTGGACCTGACCCG
C
TACTTGGAAAACCAGACCTTCTGTTTTGACCACGCCTTCGACGACAAGGCATCCAATGAACTAGTTTAC
CAG
TTCACCGCCAGGCCTCTTGTGGAGTCCATCTTCCGAAAGGGCATGGCAACTTGCTTTGCCTACGGGC
AG
ACTGGCAGTGGAAAAACCCACACGATGGGCGGAGCCTTTTTAGGAAAGGCCCAAGATTGTTCTAAAGG
C
ATTTACGCCCTGGTAGCTCAGGATGTCTTCCTCCTACTAAAAACCCCAGCCTATGAGAAATTGGAACTC
AAA
GTCTATGGGACCTTTTTTGAGATCTATGGTGGCAAAGTGTACGATCTGTTGAACTGGAAGAAGAAAC
TA
CAAGTCCTGGAGGATGGAAATCAGCAAGTCCAAGTGGTGGGGCTGCAGGAGCAGGAGGTGAGCTGTGT
G
GAGGAAGTCCTGAATCTGGTGGAGCTCGGGAACAGCTGTCGGACTTCCGGTCAGACCTCGGTCAACGCC
CAC
TCCTCCAGGAGCCATGCTGTGTTCCAGCTCATTCTCAAGGCTGGAGGGAAGCTGCACGGCAAGTTTT
CC
CTGGTTGACTTAGCTGGGAACGAAAGGGGAGCAGATACTGCCAAGGCCACCCGGAAGAGGCAGCTGGA
A
GGGGCTGAGATCAATAAAAGTCTGCTAGCCCTGAAAGAGTGCATCAGGGCTTTGGGTAAGAACAAGTCT
CAT
ACCCCATTCAGAGCCAGCAAACTCACGCAGGTGCTACGGGATTCCTTCATAGGGCAGAACTCCTATA
CG
TGCATGATCGCGACAATCTCACCCGGGATGACTTCCTGTGAGAATACTCTCAATACTTTAAGATACGC
C
AACAGAGTCAAAGAATTAGCTTTAGAGGCAAGGCCCTACCATCACTGTGTCTCTCCACCTGGCCATGAG
GTA
CCACTGATGATAGAAAACGACAATACGAATTCGGGAAAGTCCCTTCAGAGGGATGAAGTTATTCAGA
TA
CCTACTGTAGAGAAAGAGGAAGAGAAAGAAAGTGATGAACTCACATCAAAAAAGGAGCCAGCAGCTTC
A
TGGAGCAGGTCCAACCAGTGGTGGGAGGCCATCCAAGAAACGGCTGAGGGAGTCAACGGTGATGTGGAT
TTT
TGCATTGCGCAGTCTTTGTCTGTTTTGGAGCAGAAAATCGGTGTGCTGACTGATATCCAAAAAAAGC
TC
CAATCACTACGAGAAGACCTCCAAAAGAAAAGCCAAGTTGAGTGA


Translation (668 aa):
MASQFCLPLAPRLSPLKPLKSHFTDFQVGICVAIQRSDKRIHLAVVTEINRENSWVTVEWVEKGVKKGKK
I
ELETVLLLNPALASLEHQRSRRPLRPVSVVPSTAIGDQRTATKWIAMIPHRNETPSGDSQTLMIPSNPC
L
MKRKKSPCLREIEKLQKQREKRRRLQLEIRARRALDINTGNPNFETMRMIEEYRRRLDSSKMSSLEPPE
D
HRICVCVRKRPLNQRETTMKDLDIITIPSHNVVMVHESKQKVDLTRYLENQTFCFDHAFDDKASNELVY
Q
FTARPLVESIFRKGMATCFAYGQTGSGKTHTMGGAFLGKAQDCSKGIYALVAQDVFLLLKTPAYEKLEL
K
VYGTFFEIYGGKVYDLLNWKKKLQVLEDGNQQVQVVGLQEQEVSCVEEVLNLVELGNSCRTSGQTSVNA
H
SSRSHAVFQLILKAGGKLHGKFSLVDLAGNERGADTAKATRKRQLEGAEINKSLLALKECIRALGKNKS
H
TPFRASKLTQVLRDSFIGQNSYTCMIATISPGMTSCENTLNTLRYANRVKELALEARPYHHCVSPPGHE
V
PLMIENDNTNSGKSLQRDEVIQIPTVEKEEEKESDELTSKKEPAASWSRSNQWWEAIQETAEGVNGDVD
F
CIAQSLSVLEQKIGVLTDIQKKLQSLREDLQKKSQVE




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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