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Report for CCDS3631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3631.1 Public Homo sapiens 4 PYURF 24 110 108 CCDS HistoryNCBI Gene:100996939Re-query CCDS DB by CCDS ID:3631.1Re-query CCDS DB by GeneID:100996939See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3631.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273968.5 ENSP00000273968.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273968.5Link to Ensembl Protein Viewer:ENSP00000273968.4Re-query CCDS DB by Nucleotide ID:ENST00000273968Re-query CCDS DB by Protein ID:ENSP00000273968
Original member Current member NCBI NM_032906.5 NP_116295.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032906.5Link to Protein Sequence:NP_116295.1Re-query CCDS DB by Nucleotide ID:NM_032906Re-query CCDS DB by Protein ID:NP_116295Link to BLAST:NP_116295.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116295.1 114 Q96I23 114 100% 0 0

Chromosomal Locations for CCDS 3631.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 88521888 88522029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 88523498 88523700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (345 nt):
ATGCTGAGTGGAGCACGCTGCAGGCTCGCCTCAGCGCTGCGGGGAACGCGCGCGCCGCCGTCCGCGGTCG
CCCGTAGGTGCCTGCACGCGTCGGGGTCGCGGCCTTTGGCCGACCGGGGCAAGAAGACTGAGGAGCCGCC
CCGCGACTTCGATCCGGCGCTGCTGGAGTTCCTGGTGTGCCCGCTCTCCAAGAAGCCGCTCAGATATGAA
GCATCAACAAACGAATTGATTAATGAAGAGTTGGGAATAGCTTATCCAATCATTGATGGGATCCCTAATA
TGATACCACAGGCAGCTAGGATGACACGTCAAAGTAAGAAGCAAGAAGAAGTGGAGCAGCGCTAG

Translation (114 aa):
MLSGARCRLASALRGTRAPPSAVARRCLHASGSRPLADRGKKTEEPPRDFDPALLEFLVCPLSKKPLRYE
ASTNELINEELGIAYPIIDGIPNMIPQAARMTRQSKKQEEVEQR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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