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Report for CCDS36711.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36711.1 Public Mus musculus 13 Zfp457 23 108 98 CCDS HistoryNCBI Gene:431706Re-query CCDS DB by CCDS ID:36711.1Re-query CCDS DB by GeneID:431706See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36711.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049705.7 ENSMUSP00000053879.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049705.7Link to Ensembl Protein Viewer:ENSMUSP00000053879.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000049705Re-query CCDS DB by Protein ID:ENSMUSP00000053879
Original member Current member NCBI NM_001003666.2 NP_001003666.2 Accepted alive Link to Nucleotide Sequence:NM_001003666.2Link to Protein Sequence:NP_001003666.2Re-query CCDS DB by Nucleotide ID:NM_001003666Re-query CCDS DB by Protein ID:NP_001003666Link to BLAST:NP_001003666.2

Chromosomal Locations for CCDS 36711.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67292566 67294280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67295747 67295842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67296305 67296431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67306350 67306355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1944 nt):
ATGGAGGATATGTTGTCATTCTGGGATGTGGCAATATATTTCTCTGCAGAGGAGTGGGATTGCCAAGGTC
CTGCTCAGTGGGATCTGTACAGGGATGTGACATTGGAGAATTACAGCAACCTTGTGTTCCTGGGTCTTGC
TTCTTCTAAGCCATACCTGGTCACATTTCTGGAACAAATACAAGAGCCTTCAGATGTGAAGAGACAAGCG
GCCATCACTGTGCACCCAGGGGGAAAATGCTATACATGCAAAGAATGTGGCAAAGGCTTTGAACATAAAA
AAGTATATCAGAATCACTGGAGAATTCATTTAAGAGTGAAGTCCTACAAGTGTGAAGAATGTGGCAAGTC
CTTCCATTTTCCATCGTTACTTTCTGCACACAAAAGAAAGCATACAGGAGAAAAACTCTACAGTTCTGAA
GATAGTGGCAAGGACTTCCATTGTCCATCATTACTTTCTCAAAACAAGATTGTTCATACAGAAGAAAAAC
CTTACAAATGTGAAGACTGTGGCAAGGGCTTCCATTATCCATCAAGACTTTCTGACCACAAGAAAATTCA
TACAGGAGAGAAGCCACACAAGTGTGAAATATGTGGCAAGGCCTTTGATTATCCATCAAGACTTTCCAAC
CATAAGAGAATTCATACAGGAGAGAAACCCTACAAATGTGAATTATGTGACAAAACCTTCCATGATCCAT
CAAAACTTTCTCAACACAAAATAATTCATACAGGAGAAAAGCCCTACAAATGTGAAGTTTGTGGCAAGAC
CTTCCATTACCCATCCATACTTTCTAAACATAAAATAATTCATACAGGAGAAAAGCCCTACAAATGTGAA
GTTTGTGGCAAGACCTTCCATTACCCATCCATACTTTCTAAACATAAAATAATTCATACAAAAGAGAATC
TCTGCAAGTGTGATATATGTGGCAAGGCCTTCCATTATCCATTATTACTTTCTCAACACAAAATTGTTCA
TACAGGGAAAAAACCCTACAAATGTGAAAACTGCGATAAGTCCTTCCATTATCCATCAAAACTTTCCAGA
CATAAGAAAACTCACACAGGAGAAAAACCATACAAGTGTGAAGTATGTGGCAAGGATTTCTATTATCCAT
CCAGACTTTCTAAACACAAGATAGTTCATACAGAAGAAAATCCCTACAAGTGTGAAGTATGTGGCAAGGC
TTTCGACTATCCATCAAGACTTTCAAACCATAAGAAAATTCATACAGAAGAGAAACCATACAAGTGTGAA
GTATGTGGAAAGGCCTTCTGTTTTTTATCATCTCTTCATAAACACAAGATAATTCACACAGGAGAGAAAC
CCTACAAGTGTGACATATGTGGCAAGGCCTTCGGTTCTCCATCAAGACTTTCCAAAAATAGTAAAACTCA
TACAGGAGAGAAACCCTACAAGTGTGAAGTATGTGGCAAGGCCTTCCATTGTCCATCAATACTTTCTGTA
CACAAGAGAATTCATACTGGAGAAAAACCCTACAAGTGTGAAGTATGTGGCAAGGCCTTCAATATCCCAT
CAAAACTTTCTCATCACAATCGAATTCATACAAGAGAGAAACCATACAAATGTGAAGTTTGTGGTAAGGC
CTTCCATTACCCATCAAGACTTTCCAAACATAAGAAAATTCATACAGGAGGGAATCCCTACAATGCTGAA
ATGTGTAGCAAGGGCTTCAATTATCCATCAAGGCTTTCCGAACATAAGAAACTTACTACAGAAGAGAAAC
CATGCAAGTGTGAAGTATGTGGAAAAGTCTTTCACTTTCTATCATTACTTACGATACATAAGAGAATTCA
TACTGGAGAAAAACCCTACAAGTGTGAAATATGTGGCAAGGACTTCCATTATCCATCATTACTTTCTTTT
TTTTTTTTTGTTTTTTTGTTTTTTTTTTCTTTCCATTTTTTATTAGGTATTTAG

Translation (647 aa):
MEDMLSFWDVAIYFSAEEWDCQGPAQWDLYRDVTLENYSNLVFLGLASSKPYLVTFLEQIQEPSDVKRQA
AITVHPGGKCYTCKECGKGFEHKKVYQNHWRIHLRVKSYKCEECGKSFHFPSLLSAHKRKHTGEKLYSSE
DSGKDFHCPSLLSQNKIVHTEEKPYKCEDCGKGFHYPSRLSDHKKIHTGEKPHKCEICGKAFDYPSRLSN
HKRIHTGEKPYKCELCDKTFHDPSKLSQHKIIHTGEKPYKCEVCGKTFHYPSILSKHKIIHTGEKPYKCE
VCGKTFHYPSILSKHKIIHTKENLCKCDICGKAFHYPLLLSQHKIVHTGKKPYKCENCDKSFHYPSKLSR
HKKTHTGEKPYKCEVCGKDFYYPSRLSKHKIVHTEENPYKCEVCGKAFDYPSRLSNHKKIHTEEKPYKCE
VCGKAFCFLSSLHKHKIIHTGEKPYKCDICGKAFGSPSRLSKNSKTHTGEKPYKCEVCGKAFHCPSILSV
HKRIHTGEKPYKCEVCGKAFNIPSKLSHHNRIHTREKPYKCEVCGKAFHYPSRLSKHKKIHTGGNPYNAE
MCSKGFNYPSRLSEHKKLTTEEKPCKCEVCGKVFHFLSLLTIHKRIHTGEKPYKCEICGKDFHYPSLLSF
FFFVFLFFFSFHFLLGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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