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Report for CCDS36755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36755.1 Public Mus musculus 13 1700029F12Rik 23 108 98 CCDS HistoryNCBI Gene:66479Re-query CCDS DB by CCDS ID:36755.1Re-query CCDS DB by GeneID:66479See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36755.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091377.4 ENSMUSP00000088938.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091377.4Link to Ensembl Protein Viewer:ENSMUSP00000088938.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000091377Re-query CCDS DB by Protein ID:ENSMUSP00000088938
Original member Current member NCBI NM_025585.3 NP_079861.1 Accepted alive Link to Nucleotide Sequence:NM_025585.3Link to Protein Sequence:NP_079861.1Re-query CCDS DB by Nucleotide ID:NM_025585Re-query CCDS DB by Protein ID:NP_079861Link to BLAST:NP_079861.1

Chromosomal Locations for CCDS 36755.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 97022451 97022588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 97030201 97030422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 97034182 97034265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGAGCTCCAGGCAGGAATCTGACATTGGCCATGACTGGGATGTAAGCTCAGACAGGAATCTGACATCAG
GGCATGATAAGGAAGACAGCTGTGGAGCTCAAGCGGCACCCAGTGTGACAGTGAAGCCACCACTGACCCG
GAGAACCAATGTCACATGGACGGCCAACACTGCCTGTAGCCACTGCTATACTGCGTGGACTCCATCCGCT
GACACCTGCCATCATTCACCACGTGGATTGTCAGTGCTGCTGCAGGCCATGGCTGCTGCGGCCACGACTG
CTATGAGACTCACAGACTTCTACCACGATTACCAGCCACTGTCCACAGAAGACCAGCTGTCCACAGAGGA
ACCTGATGCTAATGTTTACCAAGTGGATCCTGATGGTGAAAGTCAGCTACACCCCAAAACTGACGACGCC
CCAAGACAGCAGGAGGCAGCTTAA

Translation (147 aa):
MSSRQESDIGHDWDVSSDRNLTSGHDKEDSCGAQAAPSVTVKPPLTRRTNVTWTANTACSHCYTAWTPSA
DTCHHSPRGLSVLLQAMAAAATTAMRLTDFYHDYQPLSTEDQLSTEEPDANVYQVDPDGESQLHPKTDDA
PRQQEAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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