NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36897.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36897.1 Public Mus musculus 14 Bmp4 23 108 98 CCDS HistoryNCBI Gene:12159Re-query CCDS DB by CCDS ID:36897.1Re-query CCDS DB by GeneID:12159See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36897.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074077.11 ENSMUSP00000073720.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074077.11Link to Ensembl Protein Viewer:ENSMUSP00000073720.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000074077Re-query CCDS DB by Protein ID:ENSMUSP00000073720
Original member Current member EBI ENSMUST00000100676.2 ENSMUSP00000098242.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100676.2Link to Ensembl Protein Viewer:ENSMUSP00000098242.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000100676Re-query CCDS DB by Protein ID:ENSMUSP00000098242
Original member Current member NCBI NM_001316360.1 NP_001303289.1 Accepted alive Link to Nucleotide Sequence:NM_001316360.1Link to Protein Sequence:NP_001303289.1Re-query CCDS DB by Nucleotide ID:NM_001316360Re-query CCDS DB by Protein ID:NP_001303289Link to BLAST:NP_001303289.1
Original member Current member NCBI NM_007554.3 NP_031580.2 Accepted alive Link to Nucleotide Sequence:NM_007554.3Link to Protein Sequence:NP_031580.2Re-query CCDS DB by Nucleotide ID:NM_007554Re-query CCDS DB by Protein ID:NP_031580Link to BLAST:NP_031580.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001303289.1 408 P21275 408 100% 0 0
NP_031580.2 408 P21275 408 100% 0 0

Chromosomal Locations for CCDS 36897.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 46383859 46384712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 46385715 46386087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGATTCCTGGTAACCGAATGCTGATGGTCGTTTTATTATGCCAAGTCCTGCTAGGAGGCGCGAGCCATG
CTAGTTTGATACCTGAGACCGGGAAGAAAAAAGTCGCCGAGATTCAGGGCCACGCGGGAGGACGCCGCTC
AGGGCAGAGCCATGAGCTCCTGCGGGACTTCGAGGCGACACTTCTACAGATGTTTGGGCTGCGCCGCCGT
CCGCAGCCTAGCAAGAGCGCCGTCATTCCGGATTACATGAGGGATCTTTACCGGCTCCAGTCTGGGGAGG
AGGAGGAGGAAGAGCAGAGCCAGGGAACCGGGCTTGAGTACCCGGAGCGTCCCGCCAGCCGAGCCAACAC
TGTGAGGAGTTTCCATCACGAAGAACATCTGGAGAACATCCCAGGGACCAGTGAGAGCTCTGCTTTTCGT
TTCCTCTTCAACCTCAGCAGCATCCCAGAGAATGAGGTGATCTCCTCGGCAGAGCTCCGGCTCTTTCGGG
AGCAGGTGGACCAGGGCCCTGACTGGGAACAGGGCTTCCACCGTATAAACATTTATGAGGTTATGAAGCC
CCCAGCAGAAATGGTTCCTGGACACCTCATCACACGACTACTGGACACCAGACTAGTCCATCACAATGTG
ACACGGTGGGAAACTTTCGATGTGAGCCCTGCAGTCCTTCGCTGGACCCGGGAAAAGCAACCCAATTATG
GGCTGGCCATTGAGGTGACTCACCTCCACCAGACACGGACCCACCAGGGCCAGCACGTCAGAATCAGCCG
ATCGTTACCTCAAGGGAGTGGAGATTGGGCCCAACTCCGGCCCCTCCTGGTCACTTTTGGCCATGATGGC
CGGGGCCATACCTTGACCCGCAGAAGGGCCAAACGTAGTCCCAAGCATCACCCACAGCGGTCCAGGAAGA
AGAATAAGAACTGCCGTCGCCATTCACTATACGTGGACTTCAGTGACGTGGGCTGGAATGATTGGATTGT
GGCCCCACCCGGCTACCAGGCCTTCTACTGCCACGGGGACTGTCCCTTTCCACTGGCTGATCACCTCAAC
TCAACCAACCATGCCATTGTGCAGACCCTAGTCAACTCTGTTAATTCTAGTATCCCTAAGGCCTGTTGTG
TCCCCACTGAACTGAGTGCCATTTCCATGTTGTACCTGGATGAGTATGACAAGGTGGTGTTGAAAAATTA
TCAGGAGATGGTGGTAGAGGGGTGTGGATGCCGCTGA

Translation (408 aa):
MIPGNRMLMVVLLCQVLLGGASHASLIPETGKKKVAEIQGHAGGRRSGQSHELLRDFEATLLQMFGLRRR
PQPSKSAVIPDYMRDLYRLQSGEEEEEEQSQGTGLEYPERPASRANTVRSFHHEEHLENIPGTSESSAFR
FLFNLSSIPENEVISSAELRLFREQVDQGPDWEQGFHRINIYEVMKPPAEMVPGHLITRLLDTRLVHHNV
TRWETFDVSPAVLRWTREKQPNYGLAIEVTHLHQTRTHQGQHVRISRSLPQGSGDWAQLRPLLVTFGHDG
RGHTLTRRRAKRSPKHHPQRSRKKNKNCRRHSLYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHLN
STNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCGCR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH