NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36901.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36901.1 Public Mus musculus 14 Peli2 23 108 98 CCDS HistoryNCBI Gene:93834Re-query CCDS DB by CCDS ID:36901.1Re-query CCDS DB by GeneID:93834See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36901.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073150.5 ENSMUSP00000072894.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073150.5Link to Ensembl Protein Viewer:ENSMUSP00000072894.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000073150Re-query CCDS DB by Protein ID:ENSMUSP00000072894
Original member NCBI NM_033602.2 NP_291080.2 Updated not alive Link to Nucleotide Sequence:NM_033602.2Link to Protein Sequence:NP_291080.2Re-query CCDS DB by Nucleotide ID:NM_033602Re-query CCDS DB by Protein ID:NP_291080
Current member NCBI NM_033602.3 NP_291080.2 Accepted alive Link to Nucleotide Sequence:NM_033602.3Link to Protein Sequence:NP_291080.2Re-query CCDS DB by Nucleotide ID:NM_033602Re-query CCDS DB by Protein ID:NP_291080Link to BLAST:NP_291080.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_291080.2 419 Q8BST6-1 419 99.7613% 0 1

Chromosomal Locations for CCDS 36901.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 48121157 48121233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 48168197 48168326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 48240210 48240311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 48250510 48250704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 48252577 48252765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 48256016 48256582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGTTTTCCCCGGGCCAGGAGGAACCCAGCGCCCCCAACAAGGAGCCGGTGAAATACGGGGAGCTGGTGG
TCCTGGGGTACAATGGTGCTTTACCTAATGGTGACAGGGGCAGGAGGAAAAGCAGATTTGCCCTCTATAA
GCGGACCTACGCCAGTGGTGTCAAACCCAGCACAATCCACATGGTCTCCACACCACAGGCGTCCAAGGCC
ATCAGCTCCAGAGGACATCACAGCATATCGTACACGTTGTCACGGAGCCAGACGGTAGTGGTGGAGTACA
CACACGATAAAGACACAGACATGTTTCAGGTGGGCAGGTCAACAGAAAGCCCCATTGACTTCGTGGTCAC
AGACACGGTTTCCGGCGGTCAGAACGAAGATGCCCAGATCACACAGAGCACCATCTCTAGGTTCGCATGC
AGGATCGTGTGTGACAGGAACGAGCCATACACAGCACGCATATTCGCGGCAGGATTCGATTCTTCCAAAA
ATATCTTTCTTGGAGAGAAAGCAGCAAAATGGAAAAACCCTGATGGACACATGGATGGACTCACTACCAA
CGGTGTCCTGGTGATGCACCCGCAAGGAGGCTTCACCGAGGAATCCCAGCCTGGAGTCTGGAGAGAGATC
TCTGTCTGTGGGGATGTATACACCTTGCGAGAGACCAGGTCGGCCCAGCAGAGGGGAAAGCTGGTGGAAA
GTGAGACCAACGTCCTGCAAGACGGCTCCCTCATTGACCTGTGTGGGGCCACTCTCCTCTGGAGAACCGC
AGATGGCCTTTTTCACGCTCCTACTCAGAAGCACATAGAAGCCCTCCGGCAGGAGATCAATGCAGCCCGA
CCCCAGTGCCCCGTGGGCCTTAACACCCTGGCCTTCCCCAGCATCAACCGGAAGGAAGTGGTGGAAGAGA
AGCAGCCCTGGGCATACCTGAGCTGCGGCCATGTGCACGGCTACCACAGCTGGGGCCATCGGAGCGACAC
GGAAGCCAACGAGAGGGAGTGTCCCATGTGCAGGACTGTGGGCCCCTACGTCCCTCTCTGGCTGGGCTGT
GAGGCAGGATTTTATGTCGATGCGGGACCCCCAACTCACGCTTTCACCCCCTGCGGGCACGTCTGTTCAG
AGAAGTCTGCCAAGTACTGGTCGCAGATCCCACTGCCCCACGGAACGCACGCGTTTCACGCCGCCTGTCC
GTTCTGCGCCACGCAGCTGGTTGGTGAACAGAACTGCATCAAATTGATTTTCCAAGGTCCAGTGGACTGA

Translation (419 aa):
MFSPGQEEPSAPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRTYASGVKPSTIHMVSTPQASKA
ISSRGHHSISYTLSRSQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTVSGGQNEDAQITQSTISRFAC
RIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDGHMDGLTTNGVLVMHPQGGFTEESQPGVWREI
SVCGDVYTLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRTADGLFHAPTQKHIEALRQEINAAR
PQCPVGLNTLAFPSINRKEVVEEKQPWAYLSCGHVHGYHSWGHRSDTEANERECPMCRTVGPYVPLWLGC
EAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPVD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH