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Report for CCDS36942.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36942.1 Public Mus musculus 14 Kpna3 23 108 98 CCDS HistoryNCBI Gene:16648Re-query CCDS DB by CCDS ID:36942.1Re-query CCDS DB by GeneID:16648See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36942.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022496.8 ENSMUSP00000022496.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022496.8Link to Ensembl Protein Viewer:ENSMUSP00000022496.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022496Re-query CCDS DB by Protein ID:ENSMUSP00000022496
Original member Current member NCBI NM_008466.5 NP_032492.1 Accepted alive Link to Nucleotide Sequence:NM_008466.5Link to Protein Sequence:NP_032492.1Re-query CCDS DB by Nucleotide ID:NM_008466Re-query CCDS DB by Protein ID:NP_032492Link to BLAST:NP_032492.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032492.1 521 O35344 521 100% 0 0

Chromosomal Locations for CCDS 36942.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 61367631 61367729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61368128 61368222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61370383 61370545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61370702 61370773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61370871 61370975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61372958 61373086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61374284 61374415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61383235 61383279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61384588 61384757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61385103 61385189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61387424 61387509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61391164 61391259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61391399 61391451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61391548 61391577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61391756 61391845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61402998 61403042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61439723 61439791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGGCCGAGAACCCCGGCTTGGAGAACCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGAGA
CGATGCGAAGACACAGAAATGAAGTGACAGTTGAACTCCGGAAGAACAAAAGAGACGAACACTTACTGAA
AAAGAGAAATGTTCCCCAAGAAGAAAGCTTAGAAGATTCAGATGTTGATGCTGATTTTAAAGCACAAAAT
GTAACACTAGAAGCTATATTACAGAATGCCACAAGTGATAATCCTGTAGTCCAGTTGAGTGCTGTGCAGG
CAGCAAGGAAACTATTATCCAGTGACAGAAATCCACCAATTGATGACCTAATAAAATCTGGGATTTTACC
AATTCTAGTCAAATGTCTAGAAAGAGATGATAATCCTTCATTACAGTTTGAAGCTGCTTGGGCACTAACT
AATATAGCATCGGGAACTTCTGCACAGACTCAAGCTGTTGTACAGTCTAATGCAGTACCACTTTTTCTGC
GACTCCTCCATTCCCCACATCAGAATGTTTGTGAACAAGCGGTGTGGGCTTTGGGAAACATTATAGGTGA
TGGTCCTCAATGTAGAGATTATGTCATATCACTGGGAGTTGTCAAACCTCTTCTGTCCTTCATCAATCCC
TCCATTCCCATCACCTTCCTTCGGAACGTCACATGGGTCATTGTCAATCTCTGCAGGAATAAAGACCCCC
CACCGCCTATGGAGACAGTTCAGGAGATTTTGCCAGCTTTGTGTGTGCTCATCTACCATACGGACATAAA
TATTCTTGTAGACACTGTTTGGGCGCTGTCATACTTGACAGACGGGGGAAATGAGCAAATACAGATGGTT
ATTGATTCAGGGGTTGTACCCTTCCTCGTACCCCTTCTGAGCCACCAGGAAGTCAAAGTTCAAACTGCAG
CACTCAGAGCGGTTGGGAACATAGTGACTGGCACTGATGAGCAGACCCAGGTGGTTCTCAACTGTGATGT
CCTGTCCCACTTCCCAAACCTCTTGTCACACCCAAAAGAGAAAATAAATAAGGAAGCAGTATGGTTCCTT
TCCAATATAACAGCAGGCAATCAGCAGCAAGTTCAAGCTGTAATAGATGCTGGGTTAATCCCTATGATTA
TTCATCAGCTCGCTAAGGGGGACTTTGGAACACAAAAGGAAGCTGCTTGGGCAATTAGCAACTTAACGAT
AAGTGGCAGAAAAGATCAAGTTGAATACCTTGTACAGCAGAACGTAATACCACCATTCTGTAACTTACTG
TCAGTAAAAGATTCTCAAGTGGTGCAGGTGGTTCTAGATGGTCTTAAAAACATCCTGATAATGGCTGGTG
ATGAAGCAAGCACAATAGCTGAGATCATAGAAGAGTGTGGAGGTTTGGAGAAAATTGAAGTTTTGCAGCA
ACATGAAAATGAAGACATATATAAATTAGCATTTGAAATCATAGATCAATATTTCTCTGGTGATGATATT
GATGAAGATCCTAGCCTCATTCCAGAAGCAACACAAGGAGGTACTTACAATTTTGACCCAACAGCCAACC
TTCAAACAAAAGAATTTAATTTCTAA

Translation (521 aa):
MAENPGLENHRIKSFKNKGRDVETMRRHRNEVTVELRKNKRDEHLLKKRNVPQEESLEDSDVDADFKAQN
VTLEAILQNATSDNPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALT
NIASGTSAQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFINP
SIPITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMV
IDSGVVPFLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDVLSHFPNLLSHPKEKINKEAVWFL
SNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLL
SVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGGLEKIEVLQQHENEDIYKLAFEIIDQYFSGDDI
DEDPSLIPEATQGGTYNFDPTANLQTKEFNF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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