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Report for CCDS37162.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37162.1 Public Mus musculus 15 Cyp2d40 23 108 98 CCDS HistoryNCBI Gene:71754Re-query CCDS DB by CCDS ID:37162.1Re-query CCDS DB by GeneID:71754See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37162.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055721.5 ENSMUSP00000060524.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055721.5Link to Ensembl Protein Viewer:ENSMUSP00000060524.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000055721Re-query CCDS DB by Protein ID:ENSMUSP00000060524
Original member Current member NCBI NM_023623.2 NP_076112.2 Accepted alive Link to Nucleotide Sequence:NM_023623.2Link to Protein Sequence:NP_076112.2Re-query CCDS DB by Nucleotide ID:NM_023623Re-query CCDS DB by Protein ID:NP_076112Link to BLAST:NP_076112.2

Chromosomal Locations for CCDS 37162.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82759906 82760084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82760185 82760326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82760752 82760939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82761157 82761298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82761437 82761613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82763922 82764110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1017 nt):
ATGGAGCTGCTGACTGGGACTGACCTGTGGCCTGTGGCCATATTCACAGTCATCTTCATATTACTGGTGG
ACCTGTTGCACCGGCGCCAGCGCTGGACTTCTCGCTACCCACCGGGCCCTGTGCCATGGCCTGTGCTGGG
TAACCTGCTGCAGGTGGACCTGGATAACATGCCATACAGCTTTTACAAGGTTGTGAAGATGTTCCCAATT
GTCCTGCGCATCCCAGGGTTGGCTGATAAAATCTTCCCTGGGCAAAAGACATTTCTCACCATGGTGGATA
AGCTGGTGACTGAGCACAAGAGGACCTGGGACCCTGACCAGCCACCTCGTGACCTGACTGATGCCTTTAT
GGCTGAGATGGAGACGGCAAAGGGGAACCCTGAGAGTAGCTTCAATGAAGCAAATCTACGTCTGGTTGTC
CTTGACCTGTTTGGTGGTGGGATTGTGACCACTTCAGCTACTCTGACCTGGGCCCTGCTACTCATGATTC
TGCATCCAGATGTGCAGCGCCGAGTGCAAGAGGAAATCGACGAGGTCATAGGGCAGGCACGGCGTCCAGA
GATGGCAGACCAGGCCCGCATGCCCTACACCAATGCTGTCATTCATGAGGTGCAGCGCTTTGCTGACATC
GCCCCAATGACTTTGCCACACAGGACTTCTTGTGACATTGAAGTGCAGGGCTTCCTTATCCCTAAGGGGA
CAACCCTCATCTGCAACCTGTCCTCCGTGCTGAAGGATGAGACTGTCTGGGAGAAGCCCCTCCGCTTCTA
TCCTGAACACTTCCTGGATGCCCAGGGCCACTTTGTGAAGCCTGAGGCCTTCATGCCATTCTCAGCAGGC
CGTCGAGCATGTCTGGGTGAGCCCCTGGTCCGCATGGAGCTCTTCCTCTTCTTCACCTGCCTCCTGCAGC
GCTTTAGCTTCTCAGTACCGGATGGACAGCCCCTTCCCAGTGATTATGGCATCTACTCAATGGTAGTTAG
TCCAGCACCCTACCAGCTCTGTGCAGTGGTTCGCTAG

Translation (338 aa):
MELLTGTDLWPVAIFTVIFILLVDLLHRRQRWTSRYPPGPVPWPVLGNLLQVDLDNMPYSFYKVVKMFPI
VLRIPGLADKIFPGQKTFLTMVDKLVTEHKRTWDPDQPPRDLTDAFMAEMETAKGNPESSFNEANLRLVV
LDLFGGGIVTTSATLTWALLLMILHPDVQRRVQEEIDEVIGQARRPEMADQARMPYTNAVIHEVQRFADI
APMTLPHRTSCDIEVQGFLIPKGTTLICNLSSVLKDETVWEKPLRFYPEHFLDAQGHFVKPEAFMPFSAG
RRACLGEPLVRMELFLFFTCLLQRFSFSVPDGQPLPSDYGIYSMVVSPAPYQLCAVVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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